RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 ARMC3Q5W041 872 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 DENND5AQ6IQ26 1287 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-201ENST00000262640 LMLNQ96KR4 655 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
VAMP7-201ENST00000262640 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 CD160O95971 181 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 SERPINF2P08697 491 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 PRKCHP24723 683 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 GCAP28676 217 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 ADAM15Q13444 863 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 PCSK7Q16549 785 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 FAM78AQ5JUQ0 283 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 APCDD1Q8J025 514 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 TRPV4Q9HBA0 871 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 PSMC3IPQ9P2W1 217 aaPredicted RBP13.18□□□□□ -0.3
VAMP7-201ENST00000262640 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
VAMP7-201ENST00000262640 FAM237BA0A1B0GVD1 139 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 TYRP14679 529 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 CR2P20023 1033 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 CD70P32970 193 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 MAGOHP61326 146 aaKnown RBP13.18□□□□□ -0.3
VAMP7-201ENST00000262640 CRYMQ14894 314 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 LY6G5CQ5SRR4 150 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 LINGO4Q6UY18 593 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 METTL3Q86U44 580 aaKnown RBP13.18□□□□□ -0.3
VAMP7-201ENST00000262640 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 DHRS4Q9BTZ2 278 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 DUS2Q9NX74 493 aaKnown RBP13.18□□□□□ -0.3
VAMP7-201ENST00000262640 SOX13Q9UN79 622 aa13.18□□□□□ -0.3
VAMP7-201ENST00000262640 INSIG1O15503 277 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 ATP9BO43861 1147 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 USP1O94782 785 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 ALDH1A2O94788 518 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 EPOP01588 193 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 C1QAP02745 245 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 TPH1P17752 444 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 MSH2P43246 934 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 SLC20A2Q08357 652 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 NSUN2Q08J23 767 aaKnown RBP eCLIP13.17□□□□□ -0.3
VAMP7-201ENST00000262640 FRG1Q14331 258 aaKnown RBP13.17□□□□□ -0.3
VAMP7-201ENST00000262640 EFTUD2Q15029 972 aaKnown RBP eCLIP13.17□□□□□ -0.35e-9■■■■■ 57.5
VAMP7-201ENST00000262640 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 PCID2Q5JVF3 399 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 TMEM135Q86UB9 458 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 BPIFB1Q8TDL5 484 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
VAMP7-201ENST00000262640 TTC17Q96AE7 1141 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 RSPRY1Q96DX4 576 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 LRRC3BQ96PB8 259 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 NUDCD1Q96RS6 583 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
VAMP7-201ENST00000262640 SLC2A11Q9BYW1 496 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 SCUBE2Q9NQ36 999 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 ABCB8Q9NUT2 735 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 MOCS1Q9NZB8 636 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 CTNNAL1Q9UBT7 734 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 RPS6KL1Q9Y6S9 549 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 LOC285095A0A1B0GVY8 99 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 TTC24A2A3L6 582 aaPredicted RBP13.17□□□□□ -0.3
VAMP7-201ENST00000262640 NR1D1P20393 614 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 HLA-FP30511 346 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 VIPR2P41587 438 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 RGRP47804 291 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 NR1H3Q13133 447 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 DMC1Q14565 340 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 IHHQ14623 411 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 RALGPS1Q5JS13 557 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 ATAT1Q5SQI0 421 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 KIFC1Q9BW19 673 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 NOD2Q9HC29 1040 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 LHX3Q9UBR4 397 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 INTS6Q9UL03 887 aaKnown RBP13.17□□□□□ -0.3
VAMP7-201ENST00000262640 CDH7Q9ULB5 785 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 IKBKGQ9Y6K9 419 aa13.17□□□□□ -0.3
VAMP7-201ENST00000262640 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
VAMP7-201ENST00000262640 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
VAMP7-201ENST00000262640 HLA-DPA1P20036 260 aa13.16□□□□□ -0.3
VAMP7-201ENST00000262640 SERPINH1P50454 418 aaKnown RBP13.16□□□□□ -0.3
VAMP7-201ENST00000262640 SCNN1BP51168 640 aa13.16□□□□□ -0.3
VAMP7-201ENST00000262640 RHOAP61586 193 aa13.16□□□□□ -0.3
VAMP7-201ENST00000262640 CDK18Q07002 472 aa13.16□□□□□ -0.3
VAMP7-201ENST00000262640 TMED2Q15363 201 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms