RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SCAPQ12770 1279 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 PEX6Q13608 980 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 MGAT5BQ3V5L5 792 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 DCAF6Q58WW2 860 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 METTL23Q86XA0 190 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 SCML4Q8N228 414 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 LZTR1Q8N653 840 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 BHLHE22Q8NFJ8 381 aaPredicted RBP10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 RIN3Q8TB24 985 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 TOP1MTQ969P6 601 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 PGAP3Q96FM1 320 aaPredicted RBP10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 UROC1Q96N76 676 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 SPATA13Q96N96 652 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 RANBP9Q96S59 729 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 BRD8Q9H0E9 1235 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 MRPL40Q9NQ50 206 aaKnown RBP10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 TCF7L2Q9NQB0 619 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 ARHGEF38Q9NXL2 777 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 CDH7Q9ULB5 785 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 SLC8A2Q9UPR5 921 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 ACOT8O14734 319 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 NCAM2O15394 837 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 HCRTO43612 131 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 CLASP2O75122 1294 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 TADA2AO75478 443 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 HSPA4LO95757 839 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ODC1P11926 461 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ZNF12P17014 697 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 TFE3P19532 575 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 MLH1P40692 756 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 GARSP41250 739 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 HCAR3P49019 387 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 GLUD2P49448 558 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 TKTL1P51854 596 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 GBE1Q04446 702 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 CRHR2Q13324 411 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 PAFAH1B3Q15102 231 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 MAPRE1Q15691 268 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ARL13BQ3SXY8 428 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 SLC9B1Q4ZJI4 515 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 INTS6LQ5JSJ4 861 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 KCNT2Q6UVM3 1135 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 NCCRP1Q6ZVX7 275 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 PAQR9Q6ZVX9 377 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 FAM35AQ86V20 835 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 SNX32Q86XE0 403 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 MPP5Q8N3R9 675 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 GALNT4Q8N4A0 578 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 CCDC185Q8N715 623 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ADAMTS16Q8TE57 1224 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 RNF139Q8WU17 664 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 PPP1R13LQ8WUF5 828 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 HTR3CQ8WXA8 447 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ISL2Q96A47 359 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ITPKCQ96DU7 683 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 SMARCD1Q96GM5 515 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 COX4I2Q96KJ9 171 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 GAD1Q99259 594 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 LPIN3Q9BQK8 851 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 NAT9Q9BTE0 207 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 TMEM165Q9HC07 324 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 DTLQ9NZJ0 730 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 HACD3Q9P035 362 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 TMEM216Q9P0N5 145 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 EPS15L1Q9UBC2 864 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 ADAM28Q9UKQ2 775 aa10.95□□□□□ -0.66
CHRNA1-201ENST00000261007 MYOCOSA0A1B0GUC4 107 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 FAM155AB1AL88 458 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 M0QYT0 321 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 MATN2O00339 956 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 MTSS1O43312 755 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 KLHL41O60662 606 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 CST5P28325 142 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 HMOX2P30519 316 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 PPARGP37231 505 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 MAGEA12P43365 314 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 TM4SF4P48230 202 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 PSMD8P48556 350 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 DAOAP59103 153 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 ESRRGP62508 458 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 MS4A2Q01362 244 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 CEACAM7Q14002 265 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 RAB41Q5JT25 222 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 IRAK1BP1Q5VVH5 260 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 GDF6Q6KF10 455 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 PAOXQ6QHF9 649 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 CXCL17Q6UXB2 119 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 FAM131BQ86XD5 332 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 CNTD1Q8N815 330 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 ZNF513Q8N8E2 541 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 TRPV1Q8NER1 839 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 SLC35B4Q969S0 331 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 SGF29Q96ES7 293 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 RMND5BQ96G75 393 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 ZFP42Q96MM3 310 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 ZNF385DQ9H6B1 395 aa10.94□□□□□ -0.66
CHRNA1-201ENST00000261007 EFCAB1Q9HAE3 211 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms