RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ILVBLA1L0T0 632 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 CTSAP10619 480 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 R3HCC1LQ7Z5L2 792 aaKnown RBP13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 SRLQ86TD4 932 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 EMC1Q8N766 993 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 PARD6BQ9BYG5 372 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 OPTCQ9UBM4 332 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 MDM4O15151 490 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 PPP1R26Q5T8A7 1209 aaPredicted RBP13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 ZNF571Q7Z3V5 609 aaPredicted RBP13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 TAF8Q7Z7C8 310 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 ATAD1Q8NBU5 361 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 STAG3L4Q8TBR4 150 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 ATP6V1G3Q96LB4 118 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 RNF157Q96PX1 679 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 TUBGCP5Q96RT8 1024 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 KCTD10Q9H3F6 313 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 EXO5Q9H790 373 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 C1orf232A0A0U1RR37 186 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 IFNGR2P38484 337 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 NOMO3P69849 1222 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 CASP8Q14790 479 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 MTF1Q14872 753 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 STRA8Q7Z7C7 330 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 FBXO39Q8N4B4 442 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 BBS4Q96RK4 519 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNK16Q96T55 309 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 RTP3Q9BQQ7 232 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 SOX13Q9UN79 622 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 CAPN14A8MX76 684 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 H3BNH8 94 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 YKT6O15498 198 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 ADRA1BP35368 520 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 CACNG1Q06432 222 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 MAMLD1Q13495 774 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 CYLC2Q14093 348 aaPredicted RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 CBWD6Q4V339 395 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 TMC5Q6UXY8 1006 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 CAMKK1Q8N5S9 505 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 FSBPO95073 299 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 DRD1P21728 446 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 RFC1P35251 1148 aaPredicted RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 PTPN5P54829 565 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 RAVER1Q8IY67 606 aaKnown RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 SMARCD2Q92925 531 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 RUVBL2Q9Y230 463 aaKnown RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 HCN4Q9Y3Q4 1203 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 GNG14A0A1W2PPG7 69 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 E9PAM4 449 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 CFIP05156 583 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 CD63P08962 238 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 HCAR3P49019 387 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 ATP1A2P50993 1020 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 IL27RAQ6UWB1 636 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 RPAINQ86UA6 219 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 ACTL9Q8TC94 416 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 A0A087X0T9 212 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNJ13O60928 360 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 NDST3O95803 873 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 BAG2O95816 211 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 FAM228BP0C875 321 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 AVPR1BP47901 424 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 EIF1ADQ8N9N8 165 aaKnown RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 C17orf62Q9BQA9 187 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 PCMTD2Q9NV79 361 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 IL36AQ9UHA7 158 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 TSR3Q9UJK0 312 aaKnown RBP13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 UBR2Q8IWV8 1755 aa13.56□□□□□ -0.24
PRPF38A-201ENST00000257181 WTIPA6NIX2 430 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 CSF2RAP15509 400 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ADGRF1Q5T601 910 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC38A3Q99624 504 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 SEMA3CQ99985 751 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 CNPPD1Q9BV87 410 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 LRRC10BA6NIK2 292 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 TTC36A6NLP5 189 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 OR5K4A6NMS3 321 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 DNALI1O14645 258 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 AP5Z1O43299 807 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 RRM2P31350 389 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 GRIA2P42262 883 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ABL2P42684 1182 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 CCDC85BQ15834 202 aaPredicted RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 TTLQ8NG68 377 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 RDH11Q8TC12 318 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 ZFYVE1Q9HBF4 777 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 WDR91A4D1P6 747 aa13.55□□□□□ -0.24
PRPF38A-201ENST00000257181 SPAG7O75391 227 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms