RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CDH19Q9H159 772 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TUT1Q9H6E5 874 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 GRIN2DO15399 1336 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 MED22Q15528 200 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 BROXQ5VW32 411 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ZCCHC8Q6NZY4 707 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 LGI2Q8N0V4 545 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 OR52J3Q8NH60 311 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MOCOSQ96EN8 888 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 CPNE1Q99829 537 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ZNF358Q9NW07 568 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MCUBQ9NWR8 336 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ZNF224Q9NZL3 707 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 C2orf81A6NN90 581 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 UGCGQ16739 394 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 KLHDC10Q6PID8 442 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TRABD2AQ86V40 505 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 CEP295NLQ96MC4 621 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 VPS35Q96QK1 796 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 PDGFCQ9NRA1 345 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ANKEF1Q9NU02 776 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 SLC12A4Q9UP95 1085 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 hCG_2039718K7EN88 272 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 NPM3O75607 178 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 B3GAT3O94766 335 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 UAP1L1Q3KQV9 507 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 SYT12Q8IV01 421 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.59□□□□□ -1.19
RIF1-201ENST00000243326 OR6K2Q8NGY2 324 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 KLHL5Q96PQ7 755 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 RTFDC1Q9BY42 306 aaPredicted RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 C11orf16Q9NQ32 467 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ESPL1Q14674 2120 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MAGEB3O15480 346 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MBL2P11226 248 aaPredicted RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 RHOAP61586 193 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 EIF2B5Q13144 721 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 CBR4Q8N4T8 237 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 IL31RAQ8NI17 732 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ZNF671Q8TAW3 534 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MRPL45Q9BRJ2 306 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 CHCHD6Q9BRQ6 235 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 WNK1Q9H4A3 2382 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ANXA9O76027 345 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TALDO1P37837 337 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ACADSBP45954 432 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ZNF846Q147U1 533 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ARSHQ5FYA8 562 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MRNIPQ6NTE8 343 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TPRKBQ9Y3C4 175 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 STX16-NPEPL1H3BU86 382 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TMCC2O75069 709 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ICAM1P05362 532 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TPBGLP0DKB5 382 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 CRATP43155 626 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 RPL38P63173 70 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 BOLA3Q53S33 107 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 CLNKQ7Z7G1 428 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ZNF540Q8NDQ6 660 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MCFD2Q8NI22 146 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 INPP4AQ96PE3 977 aaPredicted RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 PDGFDQ9GZP0 370 aaPredicted RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 TMEM138Q9NPI0 162 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 VPS4AQ9UN37 437 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 FOXP2O15409 715 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TFEBP19484 476 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TNFRSF8P28908 595 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 SLC26A3P40879 764 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 IRF9Q00978 393 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 PFKPQ01813 784 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TRIM71Q2Q1W2 868 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 KAT2AQ92830 837 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 CLIP3Q96DZ5 547 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 FAR2Q96K12 515 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 PXMP2Q9NR77 195 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 PDLIM1O00151 329 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 COX7A2P14406 83 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 NOS3P29474 1203 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 REP15Q6BDI9 236 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 PPP1R14AQ96A00 147 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 B3GALT6Q96L58 329 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 KREMEN1Q96MU8 473 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 AGLP35573 1532 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 GP5P40197 560 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MMP13P45452 471 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 HDAC2Q92769 488 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 TAMM41Q96BW9 452 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 EBF4Q9BQW3 602 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 COQ10BQ9H8M1 238 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 KPNA5O15131 536 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 TCEA3O75764 348 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 APOA4P06727 396 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MTHFRP42898 656 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 MAGEA10P43363 369 aaPredicted RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 PDK2Q15119 407 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 KRT77Q7Z794 578 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ANKRD46Q86W74 232 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 RIT2Q99578 217 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 ADGRB3O60242 1522 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms