RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GPR78Q96P69 363 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 OR52B2Q96RD2 323 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 TMEM209Q96SK2 561 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 TTC1Q99614 292 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 ECSITQ9BQ95 431 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 MRPL57Q9BQC6 102 aaKnown RBP22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 FSD1LQ9BXM9 530 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC25A51Q9H1U9 297 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 SCOCQ9UIL1 159 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 PPM1HQ9ULR3 514 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 SSX2IPQ9Y2D8 614 aa22.25■■□□□ 1.15
SMARCD2-201ENST00000225742 E9PAM4 449 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 F7P08709 466 aaPredicted RBP22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 TFEBP19484 476 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 PIK3R1P27986 724 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MTTPP55157 894 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MLLT6P55198 1093 aaPredicted RBP22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 INHBEP58166 350 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 CCNIQ14094 377 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 GPR162Q16538 588 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 PAN2Q504Q3 1202 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MAP3K21Q5TCX8 1036 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 ESRP1Q6NXG1 681 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MSANTD2Q6P1R3 559 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 DHDDSQ86SQ9 333 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 IFNL1Q8IU54 200 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 SERPINI1Q99574 410 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MRPL46Q9H2W6 279 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MRGBPQ9NV56 204 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 OSER1Q9NX31 292 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 SQORQ9Y6N5 450 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 GOLGA8QA0A0J9YX86 632 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 GOLGA8OA6NCC3 632 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 GOLGA8NF8WBI6 632 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 GRID2O43424 1007 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 PGK1P00558 417 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 CHRNGP07510 517 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 SAT1P21673 171 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 ARNTP27540 789 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 NDST2P52849 883 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 EPHB1P54762 984 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MPP1Q00013 466 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 CST9Q5W186 159 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 KBTBD2Q8IY47 623 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 ARHGAP18Q8N392 663 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 MRGPRX2Q96LB1 330 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 ADAM2Q99965 735 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 ZDHHC7Q9NXF8 308 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 SFMBT1Q9UHJ3 866 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 VPS28Q9UK41 221 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 CDYLQ9Y232 598 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 POMPQ9Y244 141 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 HS3ST4Q9Y661 456 aa22.24■■□□□ 1.15
SMARCD2-201ENST00000225742 LOC100653049A0A140TA62 436 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 DPPA5A6NC42 116 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 BUD23O43709 281 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 DLX3O60479 287 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 KRT34O76011 436 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 PAPOLAP51003 745 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 ZNF157P51786 506 aaPredicted RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 NAGLUP54802 743 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 ITGA7Q13683 1181 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 HNRNPDQ14103 355 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 LPIN1Q14693 890 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 FAM26DQ5JW98 314 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 KDELC1Q6UW63 502 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 GALNT7Q86SF2 657 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 DCP1BQ8IZD4 617 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 UMODL1-AS1Q8N2C9 162 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 GATA6Q92908 595 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 LENG8Q96PV6 779 aaPredicted RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 LBHD1Q9BQE6 289 aaPredicted RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 PPP1R12CQ9BZL4 782 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 ZNF385DQ9H6B1 395 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 MAN1C1Q9NR34 630 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 VPS45Q9NRW7 570 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 IPO11Q9UI26 975 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 FBXO5Q9UKT4 447 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 SCML2Q9UQR0 700 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 TLR6Q9Y2C9 796 aa22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 NYNRINQ9P2P1 1898 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-201ENST00000225742 HEATR9A2RTY3 570 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 PMPCBO75439 489 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 PAPSS2O95340 614 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 LINGO3P0C6S8 592 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 PAX7P23759 505 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 PPARGP37231 505 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC1A2P43004 574 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 RENBPP51606 427 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 SLC12A2P55011 1212 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 RPL26P61254 145 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 YWHAHQ04917 246 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 CTBP1Q13363 440 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 LSM12Q3MHD2 195 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 NEPROQ6NW34 567 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 IZUMO2Q6UXV1 221 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 PIWIL4Q7Z3Z4 852 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 ZNF598Q86UK7 904 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 MON1AQ86VX9 555 aa22.22■■□□□ 1.15
SMARCD2-201ENST00000225742 DENND6AQ8IWF6 608 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms