RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ZYG11AQ6WRX3 759 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 PHF21BQ96EK2 531 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 TMA16Q96EY4 203 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 PGAP3Q96FM1 320 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 NPAS2Q99743 824 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 KIFC1Q9BW19 673 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 KATNAL1Q9BW62 490 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 NMUR1Q9HB89 426 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 DMAP1Q9NPF5 467 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 ABI2Q9NYB9 513 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 PADI3Q9ULW8 664 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 RAP2CQ9Y3L5 183 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 PTCH2Q9Y6C5 1203 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 MAGEA13PA6NCF6 341 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 ATP5BP06576 529 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 HMBSP08397 361 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 ODC1P11926 461 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 SLC5A3P53794 718 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 AIF1P55008 147 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 DDR2Q16832 855 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 INTS6LQ5JSJ4 861 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 SH2D4BQ5SQS7 431 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 FOXB2Q5VYV0 432 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 OVOS1Q6IE37 1185 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 PTAR1Q7Z6K3 402 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 DSELQ8IZU8 1212 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 LSMEM2Q8N112 164 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 ISL2Q96A47 359 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 AAR2Q9Y312 384 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 IQCA1LA6NCM1 817 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 GLDCP23378 1020 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 ETFBP38117 255 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 SLC12A2P55011 1212 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-201ENST00000221232 HEXDCQ8WVB3 486 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 PABPC5Q96DU9 382 aaKnown RBP14.8□□□□□ -0.04
CNOT3-201ENST00000221232 GCNAQ96QF7 691 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 VAT1Q99536 393 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 TSC22D3Q99576 134 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 ADAM2Q99965 735 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 DRC3Q9H069 523 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 GPAMQ9HCL2 828 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 NT5MQ9NPB1 228 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 A0A1W2PQH9 124 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 GJB3O75712 270 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 TBX18O95935 607 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 HDCP19113 662 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 HUNKP57058 714 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 RAB10P61026 200 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 MRPS22P82650 360 aaKnown RBP14.8□□□□□ -0.04
CNOT3-201ENST00000221232 CMPK2Q5EBM0 449 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 TAF2Q6P1X5 1199 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 LINC00523Q86TU6 105 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 TRPV1Q8NER1 839 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 PPHLN1Q8NEY8 458 aaKnown RBP14.8□□□□□ -0.04
CNOT3-201ENST00000221232 FAM96AQ9H5X1 160 aa14.8□□□□□ -0.04
CNOT3-201ENST00000221232 OR51F1A6NGY5 319 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 TMEM114B3SHH9 223 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 J3KR12 359 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 TNPO2O14787 897 aaKnown RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 KCNA5P22460 613 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 THOP1P52888 689 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 COG7P83436 770 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 LBRQ14739 615 aaKnown RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 TSTD2Q5T7W7 516 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 ACAD11Q709F0 780 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 SPATA2LQ8IUW3 424 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 EXT2Q93063 718 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 POMKQ9H5K3 350 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 OSER1Q9NX31 292 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CAPN8A6NHC0 703 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 IRAK2O43187 625 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 SOAT2O75908 522 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CABYRO75952 493 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 MYL4P12829 197 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 XRCC1P18887 633 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CCNCP24863 283 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CRABP2P29373 138 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CCR1P32246 355 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 PTPRCAPQ14761 206 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 SLC39A12Q504Y0 691 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 PCDH20Q8N6Y1 951 aaKnown RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 TXNDC5Q8NBS9 432 aaKnown RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 OR6P1Q8NGX9 317 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CSNK1G1Q9HCP0 422 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 FBXO5Q9UKT4 447 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 CDYLQ9Y232 598 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 RAD54BQ9Y620 910 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 RGSL1A5PLK6 1076 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 THRAP10827 490 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 ARCN1P48444 511 aaKnown RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 ARPP19P56211 112 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 TRIM32Q13049 653 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 MSLNQ13421 630 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 ART3Q13508 389 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 SCD5Q86SK9 330 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 RYBPQ8N488 228 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 KYQ8NBH2 561 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms