RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 ASB3Q9Y575 518 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 OBSL1O75147 1896 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 SLC12A8A0AV02 714 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ERI2A8K979 691 aaKnown RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 E9PAM4 449 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 FAM72CH0Y354 149 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 TLR5O60602 858 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 FGF19O95750 216 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 MLNP12872 115 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ATF6P18850 670 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 CCNCP24863 283 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 GARSP41250 739 aaKnown RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 GRSF1Q12849 480 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNU13-201ENST00000215956 SEMA5AQ13591 1074 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 PRPSAP1Q14558 356 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 KYNUQ16719 465 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 KLHL38Q2WGJ6 581 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 TTMPQ5BVD1 217 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 FAM72AQ5TYM5 149 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 FAM72DQ6L9T8 149 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 FSTL4Q6MZW2 842 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 DNAJB7Q7Z6W7 309 aaPredicted RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 FAM72BQ86X60 149 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ZBED8Q8IZ13 594 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 RTL3Q8N8U3 475 aaKnown RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 CCDC110Q8TBZ0 833 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 GIPC2Q8TF65 315 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ARL8AQ96BM9 186 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 PLD4Q96BZ4 506 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 CNOT10Q9H9A5 744 aaKnown RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 ETNK1Q9HBU6 452 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ANLNQ9NQW6 1124 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 TMPRSS4Q9NRS4 437 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 HAUS2Q9NVX0 235 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 OSER1Q9NX31 292 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNU13-201ENST00000215956 KLHL8Q9P2G9 620 aaPredicted RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 ADAM21Q9UKJ8 722 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
SNU13-201ENST00000215956 WASF3Q9UPY6 502 aa12.47□□□□□ -0.41
SNU13-201ENST00000215956 TMEM8BA6NDV4 472 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 C4orf47A7E2U8 309 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 RNF103O00237 685 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 MSI1O43347 362 aaKnown RBP12.46□□□□□ -0.41
SNU13-201ENST00000215956 CDH16O75309 829 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 RHOQP17081 205 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 SPINK2P20155 84 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 NR1D1P20393 614 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 WEE1P30291 646 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 SLC11A2P49281 568 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 NDST2P52849 883 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 CYP4F8P98187 520 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 CREB5Q02930 508 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 DMTNQ08495 405 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 RASA2Q15283 850 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 ANO4Q32M45 955 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 CCNJLQ8IV13 435 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 ATPAF2Q8N5M1 289 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 OR2W6PQ8NHA6 318 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 AZIN2Q96A70 460 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 TSGA13Q96PP4 275 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 HHIPQ96QV1 700 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 MAGEB5Q9BZ81 275 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 ZYG11BQ9C0D3 744 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 DUSP15Q9H1R2 295 aaPredicted RBP12.46□□□□□ -0.41
SNU13-201ENST00000215956 TASP1Q9H6P5 420 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 VPS37BQ9H9H4 285 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 THG1LQ9NWX6 298 aaKnown RBP12.46□□□□□ -0.41
SNU13-201ENST00000215956 HS3ST4Q9Y661 456 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 LAMA5O15230 3695 aa12.46□□□□□ -0.41
SNU13-201ENST00000215956 FREM2Q5SZK8 3169 aa12.46□□□□□ -0.42
SNU13-201ENST00000215956 TLDC2A0PJX2 215 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 PCNX2A6NKB5 2137 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 SOAT2O75908 522 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 MAP3K6O95382 1288 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
SNU13-201ENST00000215956 IGLV3-27P01718 113 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 APRTP07741 180 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 VAV1P15498 845 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 HARS2P49590 506 aaKnown RBP12.45□□□□□ -0.42
SNU13-201ENST00000215956 SKOR1P84550 965 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 BBS9Q3SYG4 887 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 ANKRD22Q5VYY1 191 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 PID1Q7Z2X4 250 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 TDRPQ86YL5 185 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 LGMNQ99538 433 aa12.45□□□□□ -0.42
SNU13-201ENST00000215956 SMG9Q9H0W8 520 aaKnown RBP12.45□□□□□ -0.42
SNU13-201ENST00000215956 DNAJC17Q9NVM6 304 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms