RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Zfp963D3Z2T8 383 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm2832F7AEC7 200 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Stx7O70439 261 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Hspa4lP48722 838 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ccng1P51945 294 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Eps8Q08509 821 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mfsd3Q5U419 412 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Arhgap20Q6IFT4 1182 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rfx4Q7TNK1 735 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Kctd13Q8BGV7 329 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 SgtaQ8BJU0 315 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tp53inp2Q8CFU8 221 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Agpat3Q9D517 376 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Slc12a4Q9JIS8 1085 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gria4Q9Z2W8 902 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zfp646Q6NV66 1788 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm44511A0A0N4SW10 223 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zfp788E9Q980 884 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ets2P15037 468 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tgm2P21981 686 aaKnown RBP8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Klrb1bP27812 223 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 GlrbP48168 496 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam171bQ14CH0 825 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Abhd10Q6PE15 297 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tecpr1Q80VP0 1166 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Trerf1Q8BXJ2 1205 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ldlrap1Q8C142 308 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Lin7aQ8JZS0 233 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tmco1Q921L3 188 aaKnown RBP8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tnfaip8l2Q9D8Y7 184 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Atg7Q9D906 698 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cyp2j6O54750 501 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mapkapk2P49138 386 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Kcna5Q61762 602 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Serpina12Q7TMF5 413 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Timd2Q8R183 305 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 D8Ertd738eQ8R1F0 94 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Olfr348Q8VGK3 313 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Serpinb9bQ9DAV6 377 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pkp3Q9QY23 797 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Erich2E9Q1A6 463 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Galnt4O08832 578 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rgs4O08899 205 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nxpe4Q52KP5 543 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rbbp7Q60973 425 aaKnown RBP8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tatdn1Q6P8M1 295 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 SvoplQ6PDF3 494 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mtmr12Q80TA6 747 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zbtb41Q811F1 908 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Slc41a1Q8BJA2 512 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Hspbap1Q8BK58 483 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 RhoqQ8R527 205 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rev1Q920Q2 1249 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ssxb1Q9CPU1 170 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 QpctQ9CYK2 362 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cdkn2aipnlQ9D211 116 aaKnown RBP8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Maged2Q9ER67 616 aa8.58□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm6133B2RY53 190 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 2310061I04RikB8JJ69 315 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rgsl1H3BL40 1073 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 DcxO88809 366 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Kcna3P16390 528 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 LdlrP35951 862 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nup54Q8BTS4 510 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pwp2Q8BU03 919 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Sh2d5Q8JZW5 429 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Appl1Q8K3H0 707 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pcdhb11Q91UZ8 797 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Raver1Q9CW46 748 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ubqln5Q9D4I8 510 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ccdc130Q9D516 385 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tmbim4Q9DA39 238 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Q9DA42 136 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zswim8Q3UHH1 1832 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 5830411N06RikB3F5L4 1112 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Olfr603L7N1Y4 312 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Sec22bO08547 215 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Sdc4O35988 198 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 PdgfaP20033 211 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rab17P35292 214 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Usp17laQ61068 526 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Arnt2Q61324 712 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Dhx33Q80VY9 698 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Suds3Q8BR65 328 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 SntnQ8C9X1 147 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 LipmQ8K2A6 422 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Acvr1cQ8K348 493 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ndufs1Q91VD9 727 aaKnown RBP8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Socs4Q91ZA6 436 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 4930550L24RikQ99PA7 320 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Kctd4Q9D7X1 259 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Actrt1Q9D9J3 376 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Msgn1Q9JK54 188 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Egfl7Q9QXT5 275 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Chek2Q9Z265 546 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mtx3D3YTP3 312 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cldn5O54942 218 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Npr1P18293 1057 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 ItgalP24063 1163 aa8.57□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 TktP40142 623 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms