RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SPATA6LQ8N4H0 392 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF540Q8NDQ6 660 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 REPS1Q96D71 796 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 PGLYRP2Q96PD5 576 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 CIPCQ9C0C6 399 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 LEF1Q9UJU2 399 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 BTRCQ9Y297 605 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 TDRKHQ9Y2W6 561 aaKnown RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 COL3A1P02461 1466 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 NFICP08651 508 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 CCNA2P20248 432 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 WEE1P30291 646 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 ACMSDQ8TDX5 336 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 PNPOQ9NVS9 261 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 LIN7AO14910 233 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 VAV1P15498 845 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 CRATP43155 626 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 GTF2BQ00403 316 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 NBPF12Q5TAG4 269 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 LPCAT4Q643R3 524 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ARHGAP36Q6ZRI8 547 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 NT5DC4Q86YG4 428 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 SFRP1Q8N474 314 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 WNT8BQ93098 351 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 EBNA1BP2Q99848 306 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 FAM126AQ9BYI3 521 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PRDM16Q9HAZ2 1276 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ARL15Q9NXU5 204 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PRR5-ARHGAP8B1AHC4 643 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 HDAC3O15379 428 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 DBTP11182 482 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 NFKB1P19838 968 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 POLD2P49005 469 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ARHGAP8P85298 464 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 RETSATQ6NUM9 610 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 FAM81AQ8TBF8 368 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ARMC7Q9H6L4 198 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 TMEM216Q9P0N5 145 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 OR12D3Q9UGF7 316 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 TCRBV9S1A1TA0A576 114 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 A8MX80 341 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PBX1P40424 430 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PIK3CGP48736 1102 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 GTF2A2P52657 109 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 EPHB3P54753 998 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 CDC42P60953 191 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 IQCKQ8N0W5 287 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 TCF12Q99081 682 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 CLK4Q9HAZ1 481 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ERVK-5Q9HDB9 667 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 NUDT5Q9UKK9 219 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 TNPO3Q9Y5L0 923 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 UQCRBP14927 111 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 SRP54P61011 504 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 NDUFA5Q16718 116 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PHF13Q86YI8 300 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 RTL3Q8N8U3 475 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 STARD8Q92502 1023 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 POLR1EQ9GZS1 481 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ALOX15BO15296 676 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PSMD10O75832 226 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 NOS2P35228 1153 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 TGFB2P61812 414 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PLCL1Q15111 1095 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 ZC3H12AQ5D1E8 599 aaKnown RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 CDH19Q9H159 772 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PORCNQ9H237 461 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 CRNNQ9UBG3 495 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 UBA2Q9UBT2 640 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-213ENST00000638680 DMTF1Q9Y222 760 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
SCARB2-213ENST00000638680 BDNFP23560 247 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 CD86P42081 329 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 RAB10P61026 200 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 USP46P62068 366 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 RPL7AP62424 266 aaKnown RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 ACSM2AQ08AH3 577 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 SKIV2LQ15477 1246 aaKnown RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 LIPMQ5VYY2 423 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 ACSM2BQ68CK6 577 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 GCNT7Q6ZNI0 430 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 UTS2BQ765I0 119 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 HIPK1Q86Z02 1210 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 IZUMO1Q8IYV9 350 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 REXO5Q96IC2 774 aaKnown RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 ACE2Q9BYF1 805 aaPredicted RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 TECPR2O15040 1411 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 CCT3P49368 545 aaKnown RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 MZT2BQ6NZ67 158 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF438Q7Z4V0 828 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 PARP8Q8N3A8 854 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 CHID1Q9BWS9 393 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 BUD23O43709 281 aaKnown RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 TFEBP19484 476 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 FAM13CQ8NE31 585 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 ALG3Q92685 438 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms