RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CYTH1Q15438 398 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 ALYREFQ86V81 257 aaKnown RBP18.59■□□□□ 0.57
LITAF-220ENST00000620789 HDDC3Q8N4P3 179 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 ATPAF2Q8N5M1 289 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 LRRC57Q8N9N7 239 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 KIAA1524Q8TCG1 905 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 ANP32BQ92688 251 aaKnown RBP18.59■□□□□ 0.57
LITAF-220ENST00000620789 RNF25Q96BH1 459 aaPredicted RBP18.59■□□□□ 0.57
LITAF-220ENST00000620789 OMDQ99983 421 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 HEPHQ9BQS7 1158 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 GPR174Q9BXC1 333 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 BTBD1Q9H0C5 482 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 SGK2Q9HBY8 427 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 FZD4Q9ULV1 537 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.59■□□□□ 0.57
LITAF-220ENST00000620789 WASF2Q9Y6W5 498 aa18.59■□□□□ 0.57
LITAF-220ENST00000620789 GRID2IPA4D2P6 1211 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 DRD3P35462 400 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 PTGER3P43115 390 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 ARSIQ5FYB1 569 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 LYSMD4Q5XG99 296 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 ARMCX6Q7L4S7 300 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 LRRC49Q8IUZ0 686 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 KATNAL2Q8IYT4 538 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 RYBPQ8N488 228 aaPredicted RBP18.58■□□□□ 0.56
LITAF-220ENST00000620789 DEFB119Q8N690 84 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 CADM4Q8NFZ8 388 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 GRIN3AQ8TCU5 1115 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 GDAP1L1Q96MZ0 367 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 ZNF599Q96NL3 588 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 HINFPQ9BQA5 517 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 TSGA10Q9BZW7 698 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 NEUROG2Q9H2A3 272 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 ZDHHC6Q9H6R6 413 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 LHX3Q9UBR4 397 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 PCDHGA5Q9Y5G8 931 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 ZNF292O60281 2723 aa18.58■□□□□ 0.56
LITAF-220ENST00000620789 KPNA3O00505 521 aaPredicted RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 MAFKO60675 156 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 LEFTY1O75610 366 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 PALMO75781 387 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 IGSF6O95976 241 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 CTNNA1P35221 906 aaKnown RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 MARCKSL1P49006 195 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 ZNF33AQ06730 810 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 GALNT2Q10471 571 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 RFTN1Q14699 578 aaPredicted RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 POM121L1PQ3SYA9 428 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 ATXN7L2Q5T6C5 722 aaPredicted RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 SLC9A4Q6AI14 798 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 MFSD7Q6UXD7 560 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 SLC41A1Q8IVJ1 513 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 DCLK2Q8N568 766 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 OR6K2Q8NGY2 324 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 KRT35Q92764 455 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 FOXJ1Q92949 421 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 FAM131CQ96AQ9 280 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 ZNF419Q96HQ0 510 aaPredicted RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 LRIG1Q96JA1 1093 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 HSPA12BQ96MM6 686 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 MAK16Q9BXY0 300 aaKnown RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 PCED1AQ9H1Q7 454 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 ARRDC1-AS1Q9H2J1 176 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 RIF1Q5UIP0 2472 aaKnown RBP18.57■□□□□ 0.56
LITAF-220ENST00000620789 CEP192Q8TEP8 1941 aa18.57■□□□□ 0.56
LITAF-220ENST00000620789 TNRC6BQ9UPQ9 1833 aaKnown RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 BCLAF3A2AJT9 711 aaKnown RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 RNF103O00237 685 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 KRIT1O00522 736 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 APOL1O14791 398 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 KRT86O43790 486 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 ZRANB2O95218 330 aaKnown RBP eCLIP18.56■□□□□ 0.56
LITAF-220ENST00000620789 POP4O95707 220 aaKnown RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 SEMA4FO95754 770 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 PEX11BO96011 259 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 CCDC175P0C221 793 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 GKP32189 559 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 GARSP41250 739 aaKnown RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 CDKN2BP42772 138 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 CREB5Q02930 508 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 GBE1Q04446 702 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 CNTN1Q12860 1018 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 LBRQ14739 615 aaKnown RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 TAZQ16635 292 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 MYLK3Q32MK0 819 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 TMCO4Q5TGY1 634 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 CYP2U1Q7Z449 544 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 SYCE1Q8N0S2 351 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 RNF10Q8N5U6 811 aaKnown RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 PLD5Q8N7P1 536 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 EXD1Q8NHP7 514 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 VOPP1Q96AW1 172 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 ARRDC3Q96B67 414 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 PPP1R16AQ96I34 528 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 EXOC2Q96KP1 924 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 CINPQ9BW66 212 aaPredicted RBP18.56■□□□□ 0.56
LITAF-220ENST00000620789 DYRK4Q9NR20 520 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 PCDHA3Q9Y5H8 950 aa18.56■□□□□ 0.56
LITAF-220ENST00000620789 SDK1Q7Z5N4 2213 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms