RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MATN3O15232 486 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
MDC1-209ENST00000613547 MAP3K6O95382 1288 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 PYGMP11217 842 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 C5AR1P21730 350 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 CCNCP24863 283 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 CHRNA3P32297 505 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 SLC8A1P32418 973 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 HSPA9P38646 679 aaKnown RBP13.48□□□□□ -0.25
MDC1-209ENST00000613547 MAPK8P45983 427 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 PSMD8P48556 350 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 CCNHP51946 323 aaPredicted RBP13.48□□□□□ -0.25
MDC1-209ENST00000613547 ZNF33AQ06730 810 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 CCDC15Q0P6D6 951 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 LLGL1Q15334 1064 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 DPY19L3Q6ZPD9 716 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 TP53INP2Q8IXH6 220 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 GANCQ8TET4 914 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 GAB3Q8WWW8 586 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 HDAC11Q96DB2 347 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 PPP1R16AQ96I34 528 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 LRIG1Q96JA1 1093 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 PSKH2Q96QS6 385 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 SLC6A17Q9H1V8 727 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 ITM2CQ9NQX7 267 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 DYRK4Q9NR20 520 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 IL36AQ9UHA7 158 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
MDC1-209ENST00000613547 ACTL7AQ9Y615 435 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
MDC1-209ENST00000613547 DOCK4Q8N1I0 1966 aa13.48□□□□□ -0.25
MDC1-209ENST00000613547 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 KPNA3O00505 521 aaPredicted RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 KRIT1O00522 736 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 MAP3K13O43283 966 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 LILRB5O75023 590 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 POP4O95707 220 aaKnown RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 APOC2P02655 101 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 OXTRP30559 389 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 P2RY2P41231 377 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 SLC10A2Q12908 348 aaPredicted RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 ZNF211Q13398 564 aaPredicted RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 HNRNPDQ14103 355 aaKnown RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 GRM3Q14832 879 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 CYTH1Q15438 398 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 ZNF569Q5MCW4 686 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 KBTBD6Q86V97 674 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 PIP4K2CQ8TBX8 421 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 GRIN3AQ8TCU5 1115 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 FATE1Q969F0 183 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 OMDQ99983 421 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 CARD9Q9H257 536 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 PABPC3Q9H361 631 aaKnown RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 SEMA4AQ9H3S1 761 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 USP36Q9P275 1121 aaKnown RBP13.47□□□□□ -0.25
MDC1-209ENST00000613547 LHX3Q9UBR4 397 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 RAB23Q9ULC3 237 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 CYP8B1Q9UNU6 501 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 R4GN57 208 aa13.47□□□□□ -0.25
MDC1-209ENST00000613547 KCNK3O14649 394 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 MID1O15344 667 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 MTSS1O43312 755 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 RNASEH2AO75792 299 aaKnown RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 C7P10643 843 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 CCNB1P14635 433 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 CD6P30203 668 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 MMP13P45452 471 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 CSNK1DP48730 415 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 TPMTP51580 245 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 PPIDQ08752 370 aaKnown RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 NSUN2Q08J23 767 aaKnown RBP eCLIP13.46□□□□□ -0.25
MDC1-209ENST00000613547 SLC10A7Q0GE19 358 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 AP1B1Q10567 949 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 ELF2Q15723 593 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 ATXN7L2Q5T6C5 722 aaPredicted RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 NPNTQ6UXI9 565 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 USP30Q70CQ3 517 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 PAF1Q8N7H5 531 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 TSEN2Q8NCE0 465 aaKnown RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 CHST14Q8NCH0 376 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 OR6K2Q8NGY2 324 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
MDC1-209ENST00000613547 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
MDC1-209ENST00000613547 OLFM3Q96PB7 478 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms