RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 CPNE5Q9HCH3 593 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 OLFML3Q9NRN5 406 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 MRGBPQ9NV56 204 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 RIC8BQ9NVN3 520 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 MKS1Q9NXB0 559 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 CLDND1Q9NY35 253 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 ANAPC5Q9UJX4 755 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 GINS2Q9Y248 185 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 AP4B1Q9Y6B7 739 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 KDM3AQ9Y4C1 1321 aa5.17□□□□□ -1.58
SSX9-202ENST00000608568 COL1A2P08123 1366 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TPRP12270 2363 aaKnown RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 A0A0G2JND7 137 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TEX51A0A1B0GUA7 166 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CCDC194A0A1B0GVG4 234 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 SMIM35A0A1B0GVV1 85 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 ISPDA4D126 451 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 LRRIQ4A6NIV6 560 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 MEIS3P2A8K0S8 358 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 C9IYK1 514 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 H3BNH8 94 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 H3BRJ5 948 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 H3BSA7 217 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 I3L4J1 428 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 EML1O00423 815 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 HAT1O14929 419 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 MBTPS2O43462 519 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CHMP2AO43633 222 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 SLC37A4O43826 429 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 KLHL41O60662 606 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 GPR32O75388 356 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 STBD1O95210 358 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CRTAMO95727 393 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CRYZL1O95825 349 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 RPLP1P05386 114 aaKnown RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 KRT18P05783 430 aaKnown RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 CYP3A4P08684 503 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 OR52Z1P0C646 297 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 RBP3P10745 1247 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 KRT3P12035 628 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 GZMAP12544 262 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CREB1P16220 341 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CTRB1P17538 263 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PLCG1P19174 1290 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 IL32P24001 234 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PEX2P28328 305 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PKLRP30613 574 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CSTF2P33240 577 aaKnown RBP eCLIP5.16□□□□□ -1.58
SSX9-202ENST00000608568 RFC1P35251 1148 aaPredicted RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 HOXD13P35453 343 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 BMPR1AP36894 532 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 MAGEA4P43358 317 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TMBIM6P55061 237 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 MYBPC1Q00872 1141 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PRKCEQ02156 737 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 FCHO2Q0JRZ9 810 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PTP4A2Q12974 167 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CBLBQ13191 982 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 ORC1Q13415 861 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TMED2Q15363 201 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 NFIL3Q16649 462 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 EXOC3L4Q17RC7 722 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CCDC142Q17RM4 750 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 GRAMD1BQ3KR37 738 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PRR16Q569H4 304 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 EARS2Q5JPH6 523 aaKnown RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 EFHC2Q5JST6 749 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CLLU1OSQ5K130 101 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TEDDM1Q5T9Z0 273 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PLA2G4FQ68DD2 849 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CTRB2Q6GPI1 263 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 SWSAP1Q6NVH7 229 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 FBXL19Q6PCT2 694 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 IDO2Q6ZQW0 420 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PIK3AP1Q6ZUJ8 805 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 NIPA1Q7RTP0 329 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 KRT25Q7Z3Z0 450 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PCGF5Q86SE9 256 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 SETD3Q86TU7 594 aaPredicted RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 CCDC25Q86WR0 208 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TMEM173Q86WV6 379 aaPredicted RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 LURAP1LQ8IV03 231 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 FAM20CQ8IXL6 584 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 ETFBKMTQ8IXQ9 262 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 REXO1Q8N1G1 1221 aaKnown RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 FBXW8Q8N3Y1 598 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 FIBCD1Q8N539 461 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 ZNF276Q8N554 614 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 PACRGLQ8N7B6 248 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 RIN3Q8TB24 985 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 TBC1D15Q8TC07 691 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 SPPL3Q8TCT6 385 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 SLC26A7Q8TE54 656 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 BCL7CQ8WUZ0 217 aaPredicted RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 LARP4BQ92615 738 aaKnown RBP5.16□□□□□ -1.58
SSX9-202ENST00000608568 TAMM41Q96BW9 452 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 ISOC1Q96CN7 298 aa5.16□□□□□ -1.58
SSX9-202ENST00000608568 CLIP3Q96DZ5 547 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms