RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 DAPK3O43293 454 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 PLRG1O43660 514 aaKnown RBP24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 BUB1O43683 1085 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 GSRP00390 522 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 RARAP10276 462 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 CD27P26842 260 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 CCR5P51681 352 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 CCNHP51946 323 aaPredicted RBP24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 POM121L1PQ3SYA9 428 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 AFMIDQ63HM1 303 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 ERMP1Q7Z2K6 904 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 DGLUCYQ7Z3D6 616 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 ZNF354CQ86Y25 554 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 GRIN3AQ8TCU5 1115 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 HEPHQ9BQS7 1158 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 FSCN3Q9NQT6 498 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 SLCO1B1Q9Y6L6 691 aa24.65■■□□□ 1.54
UBE2E3-213ENST00000602959 C4orf47A7E2U8 309 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 H3BRJ5 948 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 KPNA3O00505 521 aaPredicted RBP24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 PROSCO94903 275 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 SYPP08247 313 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 DNA2P51530 1060 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 INO80DQ53TQ3 878 aaPredicted RBP24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 ARSIQ5FYB1 569 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 PIP5KL1Q5T9C9 394 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 TXNRD3NBQ6F5E7 133 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 LEKR1Q6ZMV7 388 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 HSPH1Q92598 858 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 ARRDC3Q96B67 414 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 TM6SF2Q9BZW4 377 aa24.64■■□□□ 1.54
UBE2E3-213ENST00000602959 KNL1Q8NG31 2342 aa24.64■■□□□ 1.53
UBE2E3-213ENST00000602959 RNF103O00237 685 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 LEFTY1O75610 366 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 TMCC1O94876 653 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 ARL4AP40617 200 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 SNRPD1P62314 119 aaKnown RBP24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 CCDC15Q0P6D6 951 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 POLNQ7Z5Q5 900 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 ARHGAP12Q8IWW6 846 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 NPWQ8N729 165 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 OR2AP1Q8NGE2 309 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 PPP1R16AQ96I34 528 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 CELF6Q96J87 481 aaKnown RBP24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 HDAC8Q9BY41 377 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 SLC39A8Q9C0K1 460 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 PDFQ9HBH1 243 aa24.63■■□□□ 1.53
UBE2E3-213ENST00000602959 A0A1W2PPC4 97 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 DCDC2BA2VCK2 349 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 ARHGAP42A6NI28 874 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 LATO43561 262 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 MAPK8P45983 427 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 AFF3P51826 1226 aaKnown RBP24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 GRIK2Q13002 908 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 HADHQ16836 314 aaKnown RBP24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 LZTR1Q8N653 840 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 FAM71BQ8TC56 605 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 TSC1Q92574 1164 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 LRIG1Q96JA1 1093 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 CSPG4P5Q96PW8 444 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 ZDHHC5Q9C0B5 715 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 PCDH18Q9HCL0 1135 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 TM9SF3Q9HD45 589 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 DYRK4Q9NR20 520 aa24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 TP53BP1Q12888 1972 aaPredicted RBP24.62■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3DA0A087WVF3 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3IA0A087WXS9 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3EA0A087X179 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3KA0A087X1G2 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3FA6NER0 549 aaPredicted RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3LB9A6J9 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 PRAMEF11O60813 436 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3HP0C7X1 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 ITGB7P26010 798 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 MAN1A1P33908 653 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 PAPOLAP51003 745 aaKnown RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 ATXN3P54252 364 aaPredicted RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TAS2R38P59533 333 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 PPP2CBP62714 309 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 PPP2CAP67775 309 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3GQ6DHY5 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3CQ6IPX1 549 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 ERN2Q76MJ5 926 aaKnown RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TRIM69Q86WT6 500 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 TBC1D3Q8IZP1 549 aaPredicted RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 VOPP1Q96AW1 172 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 GDAP1L1Q96MZ0 367 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 GTPBP2Q9BX10 602 aaKnown RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 ZDHHC6Q9H6R6 413 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 EBF2Q9HAK2 575 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 PREBQ9HCU5 417 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 RCOR3Q9P2K3 495 aaPredicted RBP24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 INTUQ9ULD6 942 aa24.61■■□□□ 1.53
UBE2E3-213ENST00000602959 MTA2O94776 668 aa24.6■■□□□ 1.53
UBE2E3-213ENST00000602959 GRIA4P48058 902 aa24.6■■□□□ 1.53
UBE2E3-213ENST00000602959 CPNE8Q86YQ8 564 aa24.6■■□□□ 1.53
UBE2E3-213ENST00000602959 RHOT2Q8IXI1 618 aa24.6■■□□□ 1.53
UBE2E3-213ENST00000602959 MINDY1Q8N5J2 469 aa24.6■■□□□ 1.53
UBE2E3-213ENST00000602959 SLC35G2Q8TBE7 412 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms