RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TPI1P60174 286 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CNTN1Q12860 1018 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 WDR45BQ5MNZ6 344 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 SYCP2LQ5T4T6 812 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 FAM46CQ5VWP2 391 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 RWDD4Q6NW29 188 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 NCEH1Q6PIU2 408 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 DSG4Q86SJ6 1040 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 PIP4P1Q86T03 277 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 VSIG1Q86XK7 387 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CACUL1Q86Y37 369 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 TP53INP2Q8IXH6 220 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 LZTR1Q8N653 840 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 ATP11CQ8NB49 1132 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CHST14Q8NCH0 376 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 ARRDC3Q96B67 414 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 LRIG1Q96JA1 1093 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CSPG4P5Q96PW8 444 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 PANX2Q96RD6 677 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 NUSAP1Q9BXS6 441 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CPEB1Q9BZB8 566 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 TRIM5Q9C035 493 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 SLC39A8Q9C0K1 460 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 DHX35Q9H5Z1 703 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 PCDH18Q9HCL0 1135 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 ETNK2Q9NVF9 386 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 DNAAF2Q9NVR5 837 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 MYO1AQ9UBC5 1043 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 LCMT1Q9UIC8 334 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 ATXN2Q99700 1313 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 A0A1B0GTW7 788 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 A0A1W2PPC4 97 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 A0A1W2PR77 199 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TSPAN11A1L157 253 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 C3orf70A6NLC5 250 aaPredicted RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ARHGAP33O14559 1287 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 AREL1O15033 823 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 BCAT2O15382 392 aaPredicted RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 AP1G1O43747 822 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 LEFTY1O75610 366 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TMCC1O94876 653 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 IL1BP01584 269 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 PRNPP04156 253 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CFIP05156 583 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF883P0CG24 379 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 GNSP15586 552 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 DESP17661 470 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ENGP17813 658 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ITGB7P26010 798 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 MAOBP27338 520 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ARHGAP25P42331 645 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 GRIA4P48058 902 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 PSMD8P48556 350 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CSNK1DP48730 415 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CCNHP51946 323 aaPredicted RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TAS2R40P59535 323 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 SFSWAPQ12872 951 aaKnown RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CYTH1Q15438 398 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TAZQ16635 292 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ACCSLQ4AC99 568 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CARD16Q5EG05 197 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 PPM1JQ5JR12 505 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 KCNT1Q5JUK3 1230 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 KIAA0895LQ68EN5 471 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 NEK5Q6P3R8 708 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 FAM124AQ86V42 546 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CCDC170Q8IYT3 715 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 RGL4Q8IZJ4 473 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 HDDC3Q8N4P3 179 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 OR2AP1Q8NGE2 309 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 SLC35G2Q8TBE7 412 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 RFFLQ8WZ73 363 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 FATE1Q969F0 183 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 CCDC42Q96M95 316 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 NSMCE3Q96MG7 304 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 HEPHQ9BQS7 1158 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 SPON2Q9BUD6 331 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TMEM9BQ9NQ34 198 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 GPR27Q9NS67 375 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 SPTLC3Q9NUV7 552 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 ZNHIT6Q9NWK9 470 aaKnown RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 LHX3Q9UBR4 397 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 SUSD2Q9UGT4 822 aa8.94□□□□□ -0.98
SSBP4-208ENST00000600628 EIF2B4Q9UI10 523 aaKnown RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 TPRP12270 2363 aaKnown RBP8.94□□□□□ -0.98
SSBP4-208ENST00000600628 LAMA5O15230 3695 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 A0A0A6YYK5 440 aaPredicted RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 LRRC72A6NJI9 287 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 MEI4A8MW99 385 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 C1QTNF3-AMACRE9PGA6 284 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 J3KR12 359 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 PLK4O00444 970 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 AKR1B10O60218 316 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 MAFKO60675 156 aa8.93□□□□□ -0.98
SSBP4-208ENST00000600628 RNASEH2AO75792 299 aaKnown RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 POP4O95707 220 aaKnown RBP8.93□□□□□ -0.98
SSBP4-208ENST00000600628 CD48P09326 243 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms