RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MARC1Q5VT66 337 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 DARS2Q6PI48 645 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 SYT13Q7L8C5 426 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 SPEM1Q8N4L4 309 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 CNTD1Q8N815 330 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 CHST14Q8NCH0 376 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 NSMCE1Q8WV22 266 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 NKD2Q969F2 451 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 ISG20Q96AZ6 181 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 CINPQ9BW66 212 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 C1QTNF1Q9BXJ1 281 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 USP29Q9HBJ7 922 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 RBM22Q9NW64 420 aaKnown RBP eCLIP20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 SEPT10Q9P0V9 454 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 SLC8A2Q9UPR5 921 aa20.34■□□□□ 0.85
SHKBP1-222ENST00000600320 BCLAF3A2AJT9 711 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 TARSL2A2RTX5 802 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 ESPNB1AK53 854 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 INSIG1O15503 277 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 ATG13O75143 517 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 GJB3O75712 270 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 HLA-DQB2P05538 268 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 PTPN3P26045 913 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 MAGEA9P43362 315 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 MAXP61244 160 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 SATB1Q01826 763 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 OASLQ15646 514 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 CCNG2Q16589 344 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 CARD16Q5EG05 197 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 DPY19L3Q6ZPD9 716 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 STK40Q8N2I9 435 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 OR2A12Q8NGT7 310 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 OR6K2Q8NGY2 324 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 HTR3CQ8WXA8 447 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 VOPP1Q96AW1 172 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 NSMCE3Q96MG7 304 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 PSKH2Q96QS6 385 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 FRMD8P1Q9BZ68 369 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 NT5MQ9NPB1 228 aa20.33■□□□□ 0.85
SHKBP1-222ENST00000600320 TTC24A2A3L6 582 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 RNF103O00237 685 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 ZNF500O60304 480 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 GKP32189 559 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 RENBPP51606 427 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 ZNF235Q14590 738 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 HEATR6Q6AI08 1181 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 METTL3Q86U44 580 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 OR2AP1Q8NGE2 309 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 FAM129BQ96TA1 746 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 NAP1L3Q99457 506 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 MGME1Q9BQP7 344 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 TMEM121Q9BTD3 319 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 IER2Q9BTL4 223 aa20.32■□□□□ 0.84
SHKBP1-222ENST00000600320 KRIT1O00522 736 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 KCNN4O15554 427 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 SYNCRIPO60506 623 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 URI1O94763 535 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 GSRP00390 522 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 CR2P20023 1033 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 KCNJ1P48048 391 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 CCNHP51946 323 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 COPAP53621 1224 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 GDF10P55107 478 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 STARD3Q14849 445 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 CYP1B1Q16678 543 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 KCTD19Q17RG1 926 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 TEX44Q53QW1 395 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 TTC27Q6P3X3 843 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 DRICH1Q6PGQ1 229 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 GDAP1L1Q96MZ0 367 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 HHIPQ96QV1 700 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 SLC6A17Q9H1V8 727 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 SPATA6Q9NWH7 488 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 EVLQ9UI08 416 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 ATP8A1Q9Y2Q0 1164 aa20.31■□□□□ 0.84
SHKBP1-222ENST00000600320 TCRBV21S2A2A0A5A6 115 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 ZBTB24O43167 697 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 MTSS1O43312 755 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 IGSF6O95976 241 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 CTSLP07711 333 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 AVPR2P30518 371 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 SNRPD1P62314 119 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 NIPAL4Q0D2K0 466 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 IHHQ14623 411 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 PLPP6Q8IY26 295 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 ZNF567Q8N184 647 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 BBS5Q8N3I7 341 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 RYBPQ8N488 228 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 FAM71DQ8N9W8 422 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 OR2T3Q8NH03 318 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 KIF18AQ8NI77 898 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 MAGOHBQ96A72 148 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 AGAP3Q96P47 875 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 MKRN2Q9H000 416 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 HECAQ9UBI9 543 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 RNF14Q9UBS8 474 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 CDC23Q9UJX2 597 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 WASF2Q9Y6W5 498 aa20.3■□□□□ 0.84
SHKBP1-222ENST00000600320 K7ESF4 209 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms