RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 DFFAO00273 331 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 LEFTY1O75610 366 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 TMCC1O94876 653 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 TBC1D3HP0C7X1 549 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 PAPOLAP51003 745 aaKnown RBP28.69■■■□□ 2.18
SSBP4-206ENST00000599699 ADPRHP54922 357 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 CDH6P55285 790 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 STPG1Q5TH74 334 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 TBC1D3GQ6DHY5 549 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 TBC1D3CQ6IPX1 549 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 TBC1D3Q8IZP1 549 aaPredicted RBP28.69■■■□□ 2.18
SSBP4-206ENST00000599699 CASKIN2Q8WXE0 1202 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 CSPG4P5Q96PW8 444 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 PANX2Q96RD6 677 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 ZDHHC6Q9H6R6 413 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 PCDH18Q9HCL0 1135 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 FSCN3Q9NQT6 498 aa28.69■■■□□ 2.18
SSBP4-206ENST00000599699 NYNRINQ9P2P1 1898 aaKnown RBP28.69■■■□□ 2.18
SSBP4-206ENST00000599699 A0A1B0GTW7 788 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 SLC7A4O43246 635 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 AMPD1P23109 780 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 SNRPD1P62314 119 aaKnown RBP28.68■■■□□ 2.18
SSBP4-206ENST00000599699 CCDC15Q0P6D6 951 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 PUM1Q14671 1186 aaKnown RBP eCLIP28.68■■■□□ 2.18
SSBP4-206ENST00000599699 ZFYVE27Q5T4F4 411 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 CCDC170Q8IYT3 715 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 NETO2Q8NC67 525 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 OR6K2Q8NGY2 324 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 RFFLQ8WZ73 363 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 PPP1R16AQ96I34 528 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 UBA2Q9UBT2 640 aaPredicted RBP28.68■■■□□ 2.18
SSBP4-206ENST00000599699 INTUQ9ULD6 942 aa28.68■■■□□ 2.18
SSBP4-206ENST00000599699 BCAT2O15382 392 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-206ENST00000599699 GSRP00390 522 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 ENGP17813 658 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 CYLC1P35663 651 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-206ENST00000599699 MAGEA1P43355 309 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 MAPK8P45983 427 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 ATXN3P54252 364 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-206ENST00000599699 RHOAP61586 193 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 SPA17Q15506 151 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 INO80DQ53TQ3 878 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-206ENST00000599699 TMCO3Q6UWJ1 677 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 PLPP6Q8IY26 295 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 LZTR1Q8N653 840 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 NPWQ8N729 165 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 KCTD6Q8NC69 237 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 OR2AP1Q8NGE2 309 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 ARRDC3Q96B67 414 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 GTPBP2Q9BX10 602 aaKnown RBP28.67■■■□□ 2.18
SSBP4-206ENST00000599699 CAPN10Q9HC96 672 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 TMEM9BQ9NQ34 198 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 DLL3Q9NYJ7 618 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 WASF2Q9Y6W5 498 aa28.67■■■□□ 2.18
SSBP4-206ENST00000599699 CHD5Q8TDI0 1954 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 J3KR12 359 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 KRIT1O00522 736 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 SLC30A4O14863 429 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 MAN1A1P33908 653 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 TAS2R40P59535 323 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 ATXN7L2Q5T6C5 722 aaPredicted RBP28.66■■■□□ 2.18
SSBP4-206ENST00000599699 AGBL4Q5VU57 503 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 ARHGAP12Q8IWW6 846 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 GDAP1L1Q96MZ0 367 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 RTKNQ9BST9 563 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 SP110Q9HB58 689 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 MFHAS1Q9Y4C4 1052 aa28.66■■■□□ 2.18
SSBP4-206ENST00000599699 C4orf47A7E2U8 309 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 PLRG1O43660 514 aaKnown RBP28.65■■■□□ 2.18
SSBP4-206ENST00000599699 PRAMEF11O60813 436 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 IGHV4-34P06331 123 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 SYPP08247 313 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 KRT7P08729 469 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 CD27P26842 260 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 GKP32189 559 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 ARHGAP25P42331 645 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 LIMK1P53667 647 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 MYLK3Q32MK0 819 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 ATP13A4Q4VNC1 1196 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 AFMIDQ63HM1 303 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 CALN1Q9BXU9 219 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 LUC7LQ9NQ29 371 aaKnown RBP28.65■■■□□ 2.18
SSBP4-206ENST00000599699 ETNK2Q9NVF9 386 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 KLHL11Q9NVR0 708 aa28.65■■■□□ 2.18
SSBP4-206ENST00000599699 LAMA1P25391 3075 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 RNF103O00237 685 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 MTA2O94776 668 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 POP4O95707 220 aaKnown RBP28.64■■■□□ 2.18
SSBP4-206ENST00000599699 IGSF6O95976 241 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 CCR5P51681 352 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 RAD51Q06609 339 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 MMRN1Q13201 1228 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 ERN2Q76MJ5 926 aaKnown RBP28.64■■■□□ 2.18
SSBP4-206ENST00000599699 TMTC1Q8IUR5 882 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 FAM131CQ96AQ9 280 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 KDM4CQ9H3R0 1056 aa28.64■■■□□ 2.18
SSBP4-206ENST00000599699 RCOR3Q9P2K3 495 aaPredicted RBP28.64■■■□□ 2.18
SSBP4-206ENST00000599699 ARHGAP33O14559 1287 aa28.63■■■□□ 2.17
SSBP4-206ENST00000599699 CD48P09326 243 aa28.63■■■□□ 2.17
SSBP4-206ENST00000599699 NOP2P46087 812 aaKnown RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms