RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 C1orf131Q8NDD1 294 aaKnown RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 OR7D4Q8NG98 312 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 SHC3Q92529 594 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 NT5C3BQ969T7 300 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 GRAMD1AQ96CP6 724 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 PGAP3Q96FM1 320 aaPredicted RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 PPP1R16AQ96I34 528 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 SLC46A1Q96NT5 459 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 KLF6Q99612 283 aaPredicted RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 CRACR2AQ9BSW2 395 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 SRRTQ9BXP5 876 aaKnown RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 SLC17A9Q9BYT1 436 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 TKTL2Q9H0I9 626 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 ABCG4Q9H172 646 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 EVA1BQ9NVM1 165 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 MPP6Q9NZW5 540 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 ZNF212Q9UDV6 495 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 IL36AQ9UHA7 158 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 HOOK1Q9UJC3 728 aaKnown RBP10.18□□□□□ -0.78
LIG1-209ENST00000596104 SATB2Q9UPW6 733 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 PCDHGA8Q9Y5G5 932 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 ENTPD2Q9Y5L3 495 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 FADS3Q9Y5Q0 445 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 ATMQ13315 3056 aa10.18□□□□□ -0.78
LIG1-209ENST00000596104 PMS2P1A4D2B8 440 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 GOLGA6L4A6NEF3 574 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 CYSRT1A8MQ03 144 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 CDRT15L2A8MXV6 281 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 K7ENP7 123 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 SPINT1O43278 529 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 AP1G1O43747 822 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 ENDOD1O94919 500 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 C6P13671 934 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 ADRB3P13945 408 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 SLC9A1P19634 815 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 ITGB7P26010 798 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 L1CAMP32004 1257 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 USP8P40818 1118 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 RABIFP47224 123 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 SERPINH1P50454 418 aaKnown RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 PFN3P60673 137 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 RPS21P63220 83 aaKnown RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 SLC6A3Q01959 620 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 C1QBPQ07021 282 aaKnown RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 EIF2B5Q13144 721 aaKnown RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 MAPK8IP2Q13387 824 aaPredicted RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 LY6DQ14210 128 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 ARHGAP44Q17R89 818 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 C3orf38Q5JPI3 329 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 INO80CQ6PI98 192 aaPredicted RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 PARS2Q7L3T8 475 aaKnown RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 EFL1Q7Z2Z2 1120 aaKnown RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 TFAP2DQ7Z6R9 452 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 VOPP1Q96AW1 172 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 ATXN7L3BQ96GX2 97 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 FEM1CQ96JP0 617 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 FAM81BQ96LP2 452 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 LENG8Q96PV6 779 aaPredicted RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.17□□□□□ -0.78
LIG1-209ENST00000596104 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 CEP44Q9C0F1 390 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 TMPRSS4Q9NRS4 437 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 RRN3Q9NYV6 651 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 APEX2Q9UBZ4 518 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 SALL4Q9UJQ4 1053 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 AJAP1Q9UKB5 411 aaPredicted RBP10.17□□□□□ -0.78
LIG1-209ENST00000596104 COL6A6A6NMZ7 2263 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 MAST4O15021 2626 aa10.17□□□□□ -0.78
LIG1-209ENST00000596104 ILVBLA1L0T0 632 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 CPED1A4D0V7 1026 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 B8ZZF3 427 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 H3BM21 787 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 BIN1O00499 593 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
LIG1-209ENST00000596104 TPP1O14773 563 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 CASC3O15234 703 aaKnown RBP10.16□□□□□ -0.78
LIG1-209ENST00000596104 AQP9O43315 295 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 CD160O95971 181 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 RBMS1P29558 406 aaKnown RBP10.16□□□□□ -0.78
LIG1-209ENST00000596104 OR1E1P30953 314 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 ABL2P42684 1182 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 RECQLP46063 649 aaPredicted RBP10.16□□□□□ -0.78
LIG1-209ENST00000596104 CCNHP51946 323 aaPredicted RBP10.16□□□□□ -0.78
LIG1-209ENST00000596104 ARF5P84085 180 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 SLC20A2Q08357 652 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 PAK1Q13153 545 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 DEFB133Q30KQ1 61 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 PERM1Q5SV97 790 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 SMYD5Q6GMV2 418 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 ZNF783Q6ZMS7 281 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 ZSCAN30Q86W11 494 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 PCDH20Q8N6Y1 951 aaKnown RBP10.16□□□□□ -0.78
LIG1-209ENST00000596104 ASB12Q8WXK4 309 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 C1orf74Q96LT6 269 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 TBCBQ99426 244 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 HEPHQ9BQS7 1158 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 BOCQ9BWV1 1114 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.16□□□□□ -0.78
LIG1-209ENST00000596104 NCKIPSDQ9NZQ3 722 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms