RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GRIA4P48058 902 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 DNA2P51530 1060 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 GEMIN4P57678 1058 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 RACK1P63244 317 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 SERINC3Q13530 473 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 TRIM14Q14142 442 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 KCNT1Q5JUK3 1230 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 N4BP2L1Q5TBK1 243 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 PSAPL1Q6NUJ1 521 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 LAYNQ6UX15 382 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 GRIN3AQ8TCU5 1115 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 BTBD6Q96KE9 485 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 HEPHQ9BQS7 1158 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 TM6SF2Q9BZW4 377 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 LRRC19Q9H756 370 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 IL21RQ9HBE5 538 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 DOCK9Q9BZ29 2069 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 ZSCAN5CA6NGD5 496 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 EEF2KO00418 725 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 BUB1O43683 1085 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 NOVA1P51513 510 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 CCNHP51946 323 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 KIF19Q2TAC6 998 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 HLA-BQ31612 363 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 PARP15Q460N3 678 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 RFX8Q6ZV50 586 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 NIPA2Q8N8Q9 360 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 SLC6A18Q96N87 628 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 NCAPGQ9BPX3 1015 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 NUP85Q9BW27 656 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 HDAC8Q9BY41 377 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 GAREM1Q9H706 876 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 HECAQ9UBI9 543 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 TPX2Q9ULW0 747 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 ANKRD6Q9Y2G4 727 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 SNX11Q9Y5W9 270 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 PLXNA2O75051 1894 aa18.82■□□□□ 0.6
SHKBP1-202ENST00000593764 SPEGQ15772 3267 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 WNT1P04628 370 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 CEACAM1P13688 526 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 HCAR3P49019 387 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 NDST2P52849 883 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 SLC14A1Q13336 389 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 PIGHQ14442 188 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 TEAD4Q15561 434 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 SLC18A3Q16572 532 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 INO80DQ53TQ3 878 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 AFMIDQ63HM1 303 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 TXNRD3NBQ6F5E7 133 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 IL27RAQ6UWB1 636 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 ERN2Q76MJ5 926 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 TRIM69Q86WT6 500 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 NETO2Q8NC67 525 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 DEFB124Q8NES8 71 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 CWC15Q9P013 229 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 ANAPC7Q9UJX3 599 aa18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 FNDC3AQ9Y2H6 1198 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-202ENST00000593764 SSU72P8A0A1W2PR75 194 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 A0A1W2PR77 199 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 VILLO15195 856 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 TMCC1O94876 653 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 GSRP00390 522 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 ERCC2P18074 760 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 GKP32189 559 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 DPYSQ14117 519 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 MYLK3Q32MK0 819 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 BOLA3Q53S33 107 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 PPP6R3Q5H9R7 873 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF354CQ86Y25 554 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 ARHGAP12Q8IWW6 846 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 OR2AP1Q8NGE2 309 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 OR6K2Q8NGY2 324 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 CELF6Q96J87 481 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 CHP1Q99653 195 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 PACSIN1Q9BY11 444 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 SLC39A8Q9C0K1 460 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 PDFQ9HBH1 243 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 PREBQ9HCU5 417 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 ABHD10Q9NUJ1 306 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 DONSONQ9NYP3 566 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 IP6K2Q9UHH9 426 aa18.8■□□□□ 0.6
SHKBP1-202ENST00000593764 J3KR12 359 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 KCNK3O14649 394 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 MFAP3LO75121 409 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 POP4O95707 220 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 CER1O95813 267 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF883P0CG24 379 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 ITGB7P26010 798 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 MAT2AP31153 395 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 CTSKP43235 329 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 ZNF135P52742 658 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 ADKP55263 362 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 SNRPD1P62314 119 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 TBX2Q13207 712 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 CYTH1Q15438 398 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 DPYSL2Q16555 572 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 ATXN7L2Q5T6C5 722 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-202ENST00000593764 SARM1Q6SZW1 724 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms