RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 LEFTY1O75610 366 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 PRNPP04156 253 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 IGHV4-34P06331 123 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TMEM253P0C7T8 217 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3HP0C7X1 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 ENGP17813 658 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 ARL4AP40617 200 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 CNTN1Q12860 1018 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 DPYSQ14117 519 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 CARD16Q5EG05 197 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 KIAA0895LQ68EN5 471 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3GQ6DHY5 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TXNRD3NBQ6F5E7 133 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3CQ6IPX1 549 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 POLNQ7Z5Q5 900 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 PLPP6Q8IY26 295 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TBC1D3Q8IZP1 549 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 ZCCHC9Q8N567 271 aaKnown RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 SLC35G2Q8TBE7 412 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 GRIN3AQ8TCU5 1115 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TEKT4Q8WW24 435 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 FAM131CQ96AQ9 280 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 CELF6Q96J87 481 aaKnown RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 HEPHQ9BQS7 1158 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TM6SF2Q9BZW4 377 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 SLC39A8Q9C0K1 460 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 KDM4CQ9H3R0 1056 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 OSGEPQ9NPF4 335 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 TMEM9BQ9NQ34 198 aa9.36□□□□□ -0.91
DNMT1-223ENST00000591239 HECAQ9UBI9 543 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-223ENST00000591239 DCDC2BA2VCK2 349 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 C4orf47A7E2U8 309 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 C10orf142B7Z368 130 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 H3BRJ5 948 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 J3KR12 359 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 RNF103O00237 685 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 TM4SF5O14894 197 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 PLRG1O43660 514 aaKnown RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 TMCC1O94876 653 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 PROSCO94903 275 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 SYPP08247 313 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CD27P26842 260 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 MAPK8P45983 427 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 PAPOLAP51003 745 aaKnown RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CCR5P51681 352 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 AFF3P51826 1226 aaKnown RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CCNHP51946 323 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ATXN3P54252 364 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 SNRPD1P62314 119 aaKnown RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 HADHQ16836 314 aaKnown RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 INO80DQ53TQ3 878 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 PIP5KL1Q5T9C9 394 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 AGBL4Q5VU57 503 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 DGLUCYQ7Z3D6 616 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CPNE8Q86YQ8 564 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ARHGAP12Q8IWW6 846 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 LZTR1Q8N653 840 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 NPWQ8N729 165 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 OR2AP1Q8NGE2 309 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CASKIN2Q8WXE0 1202 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ARRDC3Q96B67 414 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 PPP1R16AQ96I34 528 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CSPG4P5Q96PW8 444 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ORAI3Q9BRQ5 295 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 GTPBP2Q9BX10 602 aaKnown RBP9.35□□□□□ -0.91
DNMT1-223ENST00000591239 HDAC8Q9BY41 377 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 ZDHHC6Q9H6R6 413 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 PCDH18Q9HCL0 1135 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 TM9SF3Q9HD45 589 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 DYRK4Q9NR20 520 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 LCMT1Q9UIC8 334 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 SLCO1B1Q9Y6L6 691 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
DNMT1-223ENST00000591239 CACNA1EQ15878 2313 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 A0A1W2PPC4 97 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 DFFAO00273 331 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 KRIT1O00522 736 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 LATO43561 262 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 PRAMEF11O60813 436 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 POP4O95707 220 aaKnown RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 GSRP00390 522 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 AMPD1P23109 780 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 IL4RP24394 825 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ITGB7P26010 798 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 GKP32189 559 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 MAN1A1P33908 653 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 CSNK1EP49674 416 aaKnown RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 CDH6P55285 790 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 TAS2R38P59533 333 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 GRIK2Q13002 908 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 KRT81Q14533 505 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 MESDQ14696 234 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 CYTH1Q15438 398 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms