RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 TBC1D3KA0A087X1G2 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3FA6NER0 549 aaPredicted RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3LB9A6J9 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 AKR1B15C9JRZ8 316 aaPredicted RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 WNT9AO14904 365 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 SLC7A4O43246 635 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 PLRG1O43660 514 aaKnown RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 PRNPP04156 253 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TPM1P09493 284 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3HP0C7X1 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 RECQLP46063 649 aaPredicted RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 CSNK1EP49674 416 aaKnown RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 CCR5P51681 352 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 CCNHP51946 323 aaPredicted RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 NDST2P52849 883 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 PPP2CBP62714 309 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 PPP2CAP67775 309 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 GRIK2Q13002 908 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 DPYSQ14117 519 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 DPYSL2Q16555 572 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TSR1Q2NL82 804 aaKnown RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 UAP1L1Q3KQV9 507 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3GQ6DHY5 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3CQ6IPX1 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 ZNF354CQ86Y25 554 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 ARHGAP12Q8IWW6 846 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3Q8IZP1 549 aaPredicted RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 MINDY1Q8N5J2 469 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 ZNF564Q8TBZ8 553 aaPredicted RBP22.75■■□□□ 1.23
MBD3-208ENST00000590830 HSPH1Q92598 858 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 HEPHQ9BQS7 1158 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 DEF6Q9H4E7 631 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 MFHAS1Q9Y4C4 1052 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 A0A1B0GVT2 93 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 A0A1W2PPC4 97 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 MED19A0JLT2 244 aaPredicted RBP22.74■■□□□ 1.23
MBD3-208ENST00000590830 J3KR12 359 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 MYO1FO00160 1098 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 AKR1B10O60218 316 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 TMCC1O94876 653 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 SYPP08247 313 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 H2AFZP0C0S5 128 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 GEMIN4P57678 1058 aaKnown RBP22.74■■□□□ 1.23
MBD3-208ENST00000590830 CYTH1Q15438 398 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 ATXN7L2Q5T6C5 722 aaPredicted RBP22.74■■□□□ 1.23
MBD3-208ENST00000590830 LAYNQ6UX15 382 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 H2AFVQ71UI9 128 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 POLNQ7Z5Q5 900 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 TP53INP2Q8IXH6 220 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 NPWQ8N729 165 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 TC2NQ8N9U0 490 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 OR6K2Q8NGY2 324 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 PDFQ9HBH1 243 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 ETNK2Q9NVF9 386 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 CTTNBP2NLQ9P2B4 639 aa22.74■■□□□ 1.23
MBD3-208ENST00000590830 ADAMTS9Q9P2N4 1935 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 ZSCAN5CA6NGD5 496 aaPredicted RBP22.73■■□□□ 1.23
MBD3-208ENST00000590830 DAPK3O43293 454 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 GJB3O75712 270 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 PAPOLAP51003 745 aaKnown RBP22.73■■□□□ 1.23
MBD3-208ENST00000590830 AFF3P51826 1226 aaKnown RBP22.73■■□□□ 1.23
MBD3-208ENST00000590830 MYLK3Q32MK0 819 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 INO80DQ53TQ3 878 aaPredicted RBP22.73■■□□□ 1.23
MBD3-208ENST00000590830 PPM1JQ5JR12 505 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 CNGA4Q8IV77 575 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 OR2AP1Q8NGE2 309 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 TEKT4Q8WW24 435 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 CTNNBL1Q8WYA6 563 aaPredicted RBP22.73■■□□□ 1.23
MBD3-208ENST00000590830 CCDC42Q96M95 316 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 SLC6A18Q96N87 628 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 HDAC8Q9BY41 377 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 KDM4CQ9H3R0 1056 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 IL21RQ9HBE5 538 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.73■■□□□ 1.23
MBD3-208ENST00000590830 DNAAF2Q9NVR5 837 aaKnown RBP22.73■■□□□ 1.23
MBD3-208ENST00000590830 UVRAGQ9P2Y5 699 aa22.73■■□□□ 1.23
MBD3-208ENST00000590830 LATO43561 262 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 PROSCO94903 275 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 GSRP00390 522 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 TMEM253P0C7T8 217 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 AMPD1P23109 780 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 IL4RP24394 825 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 ZNF75DP51815 510 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 ZNF135P52742 658 aaPredicted RBP22.72■■□□□ 1.23
MBD3-208ENST00000590830 ATXN3P54252 364 aaPredicted RBP22.72■■□□□ 1.23
MBD3-208ENST00000590830 KIF19Q2TAC6 998 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 ATP13A4Q4VNC1 1196 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 ARHGAP36Q6ZRI8 547 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 ERN2Q76MJ5 926 aaKnown RBP22.72■■□□□ 1.23
MBD3-208ENST00000590830 TSC1Q92574 1164 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 CSPG4P5Q96PW8 444 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 ZDHHC6Q9H6R6 413 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 PCDH18Q9HCL0 1135 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 CACNA1EQ15878 2313 aa22.72■■□□□ 1.23
MBD3-208ENST00000590830 H3BRJ5 948 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 PRAMEF11O60813 436 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 WNT1P04628 370 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 ARSEP51690 589 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 TAS2R40P59535 323 aa22.71■■□□□ 1.23
MBD3-208ENST00000590830 RYBPQ8N488 228 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms