RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MALT1Q9UDY8 824 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC7A8Q9UHI5 535 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MTO1Q9Y2Z2 717 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 E2F3O00716 465 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ADAMTS4O75173 837 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SUPT3HO75486 399 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ACADSP16219 412 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZNF3P17036 446 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PLIN5Q00G26 463 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TAZQ16635 292 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SETMARQ53H47 684 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SH2D5Q6ZV89 423 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.527e-8■■□□□ 13.1
CDK5RAP3-231ENST00000584063 CMTM3Q96MX0 182 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TUBGCP5Q96RT8 1024 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SMAD5Q99717 465 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TLE6Q9H808 572 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 USP29Q9HBJ7 922 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GOLGA2P5Q9HBQ8 144 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SCOCQ9UIL1 159 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HMX2A2RU54 273 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TXNDC9O14530 226 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RFPL1O75677 317 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CCDC130P13994 396 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ADORA2BP29275 332 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 BCAR1P56945 870 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC10A2Q12908 348 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPP2R5DQ14738 602 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ANKDD1AQ495B1 522 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TMEM164Q5U3C3 297 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PDE12Q6L8Q7 609 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 UNC5AQ6ZN44 842 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 LPCAT2Q7L5N7 544 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC26A11Q86WA9 606 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TP53INP2Q8IXH6 220 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ULK2Q8IYT8 1036 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 UTP15Q8TED0 518 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SNRNP25Q9BV90 132 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MRPL9Q9BYD2 267 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DPP3Q9NY33 737 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DPP7Q9UHL4 492 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PLLPQ9Y342 182 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 AK5Q9Y6K8 562 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 E7ESA3 106 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MED7O43513 233 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PRPSAP2O60256 369 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MCF2P10911 925 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NCF2P19878 526 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PITX1P78337 314 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PURAQ00577 322 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TAP1Q03518 808 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 KCNJ11Q14654 390 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NOMO1Q15155 1222 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SURF1Q15526 300 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 OR52E8Q6IFG1 317 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 LINC01465Q8N7H1 131 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC26A7Q8TE54 656 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PNPOQ9NVS9 261 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DNAJC16Q9Y2G8 782 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PSAT1Q9Y617 370 aa11.79□□□□□ -0.52
CDK5RAP3-231ENST00000584063 LRRC37A2A6NM11 1700 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SCN1AP35498 2009 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 WDR27A2RRH5 827 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PAPSS1O43252 624 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GPR32O75388 356 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SNRPAP09012 282 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DHRS4L1P0CG22 281 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ANPEPP15144 967 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC18A1P54219 525 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PDE1BQ01064 536 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PDE1CQ14123 709 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ARHGAP18Q8N392 663 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 FNIP1Q8TF40 1166 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DEPDC1BQ8WUY9 529 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RNF157Q96PX1 679 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 UNKQ9C0B0 810 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 EBF3Q9H4W6 596 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 POPDC2Q9HBU9 364 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 XPNPEP3Q9NQH7 507 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 USP12O75317 370 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DGKIO75912 1065 aa11.78□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C1QAP02745 245 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms