RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 DPYSQ14117 519 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 NETO2Q8NC67 525 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 TMIEQ8NEW7 156 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 OR2T34Q8NGX1 318 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 OR6K2Q8NGY2 324 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 RFFLQ8WZ73 363 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 DNASE2BQ8WZ79 361 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ISG20Q96AZ6 181 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 BIRC7Q96CA5 298 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 CSPG4P5Q96PW8 444 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 HEPHQ9BQS7 1158 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 SLC39A8Q9C0K1 460 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ZDHHC6Q9H6R6 413 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 FSCN3Q9NQT6 498 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 KLHL11Q9NVR0 708 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 HECAQ9UBI9 543 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 UBA2Q9UBT2 640 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 INTUQ9ULD6 942 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 A0A1B0GTW7 788 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 J3KR12 359 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 KRIT1O00522 736 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 SLC7A4O43246 635 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 LEFTY1O75610 366 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 SERPINF2P08697 491 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 MAN1A1P33908 653 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 MAPK8P45983 427 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 ATXN3P54252 364 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TAS2R40P59535 323 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 RHOAP61586 193 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 SPA17Q15506 151 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 ATP13A4Q4VNC1 1196 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 ATXN7L2Q5T6C5 722 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TMCO3Q6UWJ1 677 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 ARHGAP12Q8IWW6 846 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 CCDC170Q8IYT3 715 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 LZTR1Q8N653 840 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 NPWQ8N729 165 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 OR2AP1Q8NGE2 309 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 CASKIN2Q8WXE0 1202 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 ARRDC3Q96B67 414 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 GTPBP2Q9BX10 602 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 CALN1Q9BXU9 219 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 SP110Q9HB58 689 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 MFHAS1Q9Y4C4 1052 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 WASF2Q9Y6W5 498 aa12.82□□□□□ -0.36
SMARCE1-218ENST00000582955 DMXL1Q9Y485 3027 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 RNF103O00237 685 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 BCAT2O15382 392 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 PRAMEF11O60813 436 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 MTA2O94776 668 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 IPO7O95373 1038 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 IGSF6O95976 241 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 GSRP00390 522 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 IGHV4-34P06331 123 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 KRT7P08729 469 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 CD48P09326 243 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 ENGP17813 658 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 GKP32189 559 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 ARHGAP25P42331 645 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 PUM1Q14671 1186 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 INO80DQ53TQ3 878 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 STPG1Q5TH74 334 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 AGBL4Q5VU57 503 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 AFMIDQ63HM1 303 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 TMTC1Q8IUR5 882 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 SPC24Q8NBT2 197 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 KCTD6Q8NC69 237 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 EXOC2Q96KP1 924 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 GDAP1L1Q96MZ0 367 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 PDFQ9HBH1 243 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 CAPN10Q9HC96 672 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 ETNK2Q9NVF9 386 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 RCOR3Q9P2K3 495 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 PCDHA13Q9Y5I0 950 aa12.81□□□□□ -0.36
SMARCE1-218ENST00000582955 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 C4orf47A7E2U8 309 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms