RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 OR51B4Q9Y5P0 310 aa12.85□□□□□ -0.35
CSNK1D-218ENST00000581655 SDK2Q58EX2 2172 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 K7ERQ8 282 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 M0QYV0 167 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 PRNPP04156 253 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 TSHRP16473 764 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 IRAK1P51617 712 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 NEK3P51956 506 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 MAPK10P53779 464 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 PFN3P60673 137 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 CUL4AQ13619 759 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 TTC39BQ5VTQ0 682 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 ATP11CQ8NB49 1132 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 USP7Q93009 1102 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 FEM1CQ96JP0 617 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 HSFY1Q96LI6 401 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 KLF6Q99612 283 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 SLC12A9Q9BXP2 914 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 SIRPGQ9P1W8 387 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 PLEKHB1Q9UF11 243 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 MTMR6Q9Y217 621 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 HS3ST2Q9Y278 367 aa12.84□□□□□ -0.35
CSNK1D-218ENST00000581655 A0A1W2PQ27 194 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 A0A1W2PQ64 194 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 A0A1W2PQC6 194 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 KCNU1A8MYU2 1149 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 C9orf172C9J069 976 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 SNAP91O60641 907 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 CELA2BP08218 269 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 RRM1P23921 792 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 THOP1P52888 689 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 YWHAEP62258 255 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 SGCGQ13326 291 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 NFIL3Q16649 462 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 FBXL22Q6P050 247 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 CEP57L1Q8IYX8 460 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 ARL10Q8N8L6 244 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 KYQ8NBH2 561 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 PPP1R16AQ96I34 528 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 ZSWIM1Q9BR11 485 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 SLC13A1Q9BZW2 595 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 ZSCAN16Q9H4T2 348 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.362e-8■■□□□ 13.7
CSNK1D-218ENST00000581655 IL36AQ9UHA7 158 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 SERTAD1Q9UHV2 236 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 TUBD1Q9UJT1 453 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 KIAA1257Q9ULG3 409 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
CSNK1D-218ENST00000581655 IGLON5A6NGN9 336 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 SMAD6O43541 496 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 LEFTY1O75610 366 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 TRUB2O95900 331 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 ADRB3P13945 408 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 BRD2P25440 801 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 CCR10P46092 362 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 ADAM9Q13443 819 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 PTK2BQ14289 1009 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 TCEA2Q15560 299 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 CNGA2Q16280 664 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 TMEM270Q6UE05 265 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 UBR7Q8N806 425 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 PCDH19Q8TAB3 1148 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 TBATAQ96M53 351 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 PSMB7Q99436 277 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 C1QTNF2Q9BXJ5 285 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 MUC3BQ9H195 1237 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 TNKS2Q9H2K2 1166 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 ZNF71Q9NQZ8 489 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 FAM13BQ9NYF5 915 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 MAPK8IP1Q9UQF2 711 aa12.82□□□□□ -0.36
CSNK1D-218ENST00000581655 SART1O43290 800 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 ENDOD1O94919 500 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 YEATS4O95619 227 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 CALCAP01258 141 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 IGLV3-25P01717 112 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 PAEPP09466 180 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 CD82P27701 267 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 GGCXP38435 758 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 RECQLP46063 649 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 MCCD1P59942 119 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 KRT83P78385 493 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 ZFP36L1Q07352 338 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 LRMPQ12912 555 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
CSNK1D-218ENST00000581655 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms