RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PJA1Q8NG27 643 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 ATG4AQ8WYN0 398 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 CLDN23Q96B33 292 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 MRGPRX3Q96LB0 322 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 IL12RB2Q99665 862 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 FAM118BQ9BPY3 351 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 TMEM121Q9BTD3 319 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 POLR1EQ9GZS1 481 aaKnown RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 TMEM245Q9H330 911 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 USP29Q9HBJ7 922 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.09
SKA2-205ENST00000580541 KLHL8Q9P2G9 620 aaPredicted RBP14.52□□□□□ -0.09
SKA2-205ENST00000580541 CHURC1-FNTBB4DL54 471 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 RNF103O00237 685 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 GCATO75600 419 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 KLF8O95600 359 aaPredicted RBP14.51□□□□□ -0.09
SKA2-205ENST00000580541 PEX11BO96011 259 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 EPHX1P07099 455 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 CA4P22748 312 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 TNNT3P45378 269 aaPredicted RBP14.51□□□□□ -0.09
SKA2-205ENST00000580541 STK19P49842 368 aaPredicted RBP14.51□□□□□ -0.09
SKA2-205ENST00000580541 CLCN5P51795 746 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 SFSWAPQ12872 951 aaKnown RBP14.51□□□□□ -0.09
SKA2-205ENST00000580541 ENPP2Q13822 863 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 CYTH1Q15438 398 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 P3H1Q32P28 736 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 EMC10Q5UCC4 262 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 CCDC70Q6NSX1 233 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 C22orf39Q6P5X5 142 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 LEKR1Q6ZMV7 388 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 ARHGEF18Q6ZSZ5 1173 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 RYBPQ8N488 228 aaPredicted RBP14.51□□□□□ -0.09
SKA2-205ENST00000580541 FAM71DQ8N9W8 422 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 OR2AP1Q8NGE2 309 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 RPLP0P6Q8NHW5 317 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 LRIG1Q96JA1 1093 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 TEKT5Q96M29 485 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 NT5MQ9NPB1 228 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 PCYOX1Q9UHG3 505 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
SKA2-205ENST00000580541 ATG2BQ96BY7 2078 aa14.51□□□□□ -0.09
SKA2-205ENST00000580541 NYNRINQ9P2P1 1898 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 TMEM221A6NGB7 291 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 SHISA7A6NL88 538 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 TTC34A8MYJ7 566 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 M0R296 226 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 PDE2AO00408 941 aaPredicted RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 ALOX15BO15296 676 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 PSMD3O43242 534 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 SMAD6O43541 496 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 ECEL1O95672 775 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 CD160O95971 181 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 IFNB1P01574 187 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 PTPN3P26045 913 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 IL12RB1P42701 662 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 NUMBP49757 651 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 AP1S1P61966 158 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 CCDC15Q0P6D6 951 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 DHX34Q14147 1143 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 ELAVL3Q14576 367 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 PPP1R7Q15435 360 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 MYLK3Q32MK0 819 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 ANKRD20A2Q5SQ80 823 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 ANKRD20A1Q5TYW2 823 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 ANKRD20A3Q5VUR7 823 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 ZNF687Q8N1G0 1237 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 ALLCQ8N6M5 410 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 IL17RCQ8NAC3 791 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 TXNDC5Q8NBS9 432 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 TSEN2Q8NCE0 465 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 FRS2Q8WU20 508 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 OR8D1Q8WZ84 308 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 EZH1Q92800 747 aaPredicted RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 RTP4Q96DX8 246 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 SPATA13Q96N96 652 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 AGAP3Q96P47 875 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 TUBGCP5Q96RT8 1024 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 GABRG3Q99928 467 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 MGME1Q9BQP7 344 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 FOXQ1Q9C009 403 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 POLMQ9NP87 494 aaPredicted RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 SCUBE2Q9NQ36 999 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 CACNA2D2Q9NY47 1150 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 SMARCAL1Q9NZC9 954 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 PAK5Q9P286 719 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 MMP17Q9ULZ9 603 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 ATP8A1Q9Y2Q0 1164 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 AAR2Q9Y312 384 aaKnown RBP14.5□□□□□ -0.09
SKA2-205ENST00000580541 TTLL3Q9Y4R7 772 aa14.5□□□□□ -0.09
SKA2-205ENST00000580541 A0A1W2PQ67 120 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 K7ERQ8 282 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 TNFRSF10AO00220 468 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 NDC80O14777 642 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 ANXA9O76027 345 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 ALDH1A2O94788 518 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 PRNPP04156 253 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 SERPINF2P08697 491 aa14.49□□□□□ -0.09
SKA2-205ENST00000580541 HOXB2P14652 356 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms