RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ZNF235Q14590 738 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 TRMT11Q7Z4G4 463 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 KLHL7Q8IXQ5 586 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 CCDC105Q8IYK2 499 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF567Q8N184 647 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 PGBD5Q8N414 524 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 ALLCQ8N6M5 410 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 PCDH20Q8N6Y1 951 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 RPLP0P6Q8NHW5 317 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 TEKT5Q96M29 485 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 CCDC114Q96M63 670 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 NT5MQ9NPB1 228 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 ATP8A1Q9Y2Q0 1164 aa16.16■□□□□ 0.18
CSNK1D-212ENST00000580061 BDP1A6H8Y1 2624 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 STK25O00506 426 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 STK10O94804 968 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 HLA-EP13747 358 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 HSPA9P38646 679 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 WASP42768 502 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 RGRP47804 291 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 LMNB2Q03252 620 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 HNRNPA1L2Q32P51 320 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 HSF5Q4G112 596 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 SDE2Q6IQ49 451 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 Q6ZS52 159 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 Q6ZVU0 165 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 PLPP6Q8IY26 295 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF366Q8N895 744 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 CEP112Q8N8E3 955 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 TXNDC5Q8NBS9 432 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 MNS1Q8NEH6 495 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 PTPRN2Q92932 1015 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 CLDN23Q96B33 292 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 EXOC2Q96KP1 924 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 SPATA13Q96N96 652 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 AGAP3Q96P47 875 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 GABRG3Q99928 467 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 MGME1Q9BQP7 344 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 TM6SF2Q9BZW4 377 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 TNKS2Q9H2K2 1166 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 MFSD1Q9H3U5 465 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 MTG2Q9H4K7 406 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 HAUS2Q9NVX0 235 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 KLHL8Q9P2G9 620 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 SUN2Q9UH99 717 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 PCYOX1Q9UHG3 505 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 TRHDEQ9UKU6 1024 aa16.15■□□□□ 0.18
CSNK1D-212ENST00000580061 EDDM13A0A1B0GTR0 161 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 TARSL2A2RTX5 802 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CHURC1-FNTBB4DL54 471 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 ZBTB24O43167 697 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 ADAM23O75077 832 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 GCATO75600 419 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 NEBLO76041 1014 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 KLF8O95600 359 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 GSRP00390 522 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 EPHX1P07099 455 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CR2P20023 1033 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CD68P34810 354 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 MAXP61244 160 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 SNRPD1P62314 119 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 P3H1Q32P28 736 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CARD16Q5EG05 197 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 ANKRD20A2Q5SQ80 823 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 ANKRD20A1Q5TYW2 823 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 ANKRD20A3Q5VUR7 823 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CWF19L1Q69YN2 538 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 ALG1LQ6GMV1 187 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 PKN3Q6P5Z2 889 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 GSTA5Q7RTV2 222 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 PID1Q7Z2X4 250 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 FLCNQ8NFG4 579 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 OR2AP1Q8NGE2 309 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CCDC110Q8TBZ0 833 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 GRK7Q8WTQ7 553 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 SLCO2A1Q92959 643 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 RUNDC3BQ96NL0 473 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 KRT12Q99456 494 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 POLR1EQ9GZS1 481 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 FEZ2Q9UHY8 353 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 SIT1Q9Y3P8 196 aa16.14■□□□□ 0.17
CSNK1D-212ENST00000580061 CTAGE15A4D2H0 777 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 TMEM221A6NGB7 291 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 M0R296 226 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 OPHN1O60890 802 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 SIN3BO75182 1162 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 IGSF6O95976 241 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 IFNB1P01574 187 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 CTAGE8P0CG41 777 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 ETS1P14921 441 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 PTGIRP43119 386 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 CSNK1DP48730 415 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 GAS6Q14393 721 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 EOGTQ5NDL2 527 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 ATXN7L2Q5T6C5 722 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 C9orf64Q5T6V5 341 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 PRUNE1Q86TP1 453 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 CTAGE6Q86UF2 777 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms