RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	HOOK1	Q9UJC3	728 aa	Known RBP	9.83	□□□□□ -0.84
MSI2-208	ENST00000579466	CNTN6	Q9UQ52	1028 aa		9.83	□□□□□ -0.84
MSI2-208	ENST00000579466	ITM2B	Q9Y287	266 aa		9.83	□□□□□ -0.84
MSI2-208	ENST00000579466	TBC1D30	Q9Y2I9	924 aa		9.83	□□□□□ -0.84
MSI2-208	ENST00000579466	FCF1	Q9Y324	198 aa	Known RBP	9.83	□□□□□ -0.84
MSI2-208	ENST00000579466	ACTL7A	Q9Y615	435 aa		9.83	□□□□□ -0.84
MSI2-208	ENST00000579466	NAV2	Q8IVL1	2488 aa		9.83	□□□□□ -0.84
MSI2-208	ENST00000579466		A0A1W2PNU3	283 aa	Predicted RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	BICDL2	A1A5D9	508 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	PPP1R3G	B7ZBB8	358 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466		I6L893	689 aa	Predicted RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC28A2	O43868	658 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	SRGAP2	O75044	1071 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	GP1BA	P07359	652 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	ADRB3	P13945	408 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	JUND	P17535	347 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC9A1	P19634	815 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	BMP6	P22004	513 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	OR1E1	P30953	314 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	GK	P32189	559 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	VASP	P50552	380 aa	Predicted RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	VAC14	Q08AM6	782 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	CCDC15	Q0P6D6	951 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	C1orf61	Q13536	156 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	MEA1	Q16626	185 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	PTPN20	Q4JDL3	420 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	TMEM259	Q4ZIN3	620 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	LRRC73	Q5JTD7	316 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	PERM1	Q5SV97	790 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	ZCCHC8	Q6NZY4	707 aa	Known RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	NEK5	Q6P3R8	708 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	TRIM65	Q6PJ69	517 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	KYAT3	Q6YP21	454 aa	Known RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	PARS2	Q7L3T8	475 aa	Known RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	DRC7	Q8IY82	874 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	DCAF4L2	Q8NA75	395 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	TMIE	Q8NEW7	156 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	IL12RB2	Q99665	862 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	DUSP23	Q9BVJ7	150 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC17A9	Q9BYT1	436 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	TCEAL2	Q9H3H9	227 aa	Predicted RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	WDCP	Q9H6R7	721 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	ATP13A1	Q9HD20	1204 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	ASNSD1	Q9NWL6	643 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	AJAP1	Q9UKB5	411 aa	Predicted RBP	9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	WASF2	Q9Y6W5	498 aa		9.82	□□□□□ -0.84
MSI2-208	ENST00000579466	CHD5	Q8TDI0	1954 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	SPTY2D1-AS1	A0A0U1RR47	76 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	NEMP1	O14524	444 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	FPGT	O14772	594 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	SPINT1	O43278	529 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	AQP9	O43315	295 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	DXO	O77932	396 aa	Known RBP	9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	GNA14	O95837	355 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	GLI1	P08151	1106 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	NME1	P15531	152 aa	Known RBP	9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	NOS2	P35228	1153 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	ABL2	P42684	1182 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	CCNH	P51946	323 aa	Predicted RBP	9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	ERVPABLB-1	P60509	514 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	RPS21	P63220	83 aa	Known RBP	9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC6A3	Q01959	620 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	DEUP1	Q05D60	604 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	PAK1	Q13153	545 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	NR0B2	Q15466	257 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	C2CD6	Q53TS8	623 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	KIAA1161	Q6NSJ0	714 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	LRRC31	Q6UY01	552 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	LEKR1	Q6ZMV7	388 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	RBM44	Q6ZP01	1051 aa	Known RBP	9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	PRICKLE2	Q7Z3G6	844 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	TTC9	Q92623	222 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	TBCB	Q99426	244 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	HDAC8	Q9BY41	377 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	TRIM4	Q9C037	500 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	PDCL3	Q9H2J4	239 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	SIRPG	Q9P1W8	387 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	APEX2	Q9UBZ4	518 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	APOBEC3B	Q9UH17	382 aa	Known RBP	9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	STAP1	Q9ULZ2	295 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	ENTPD2	Q9Y5L3	495 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	FADS3	Q9Y5Q0	445 aa		9.81	□□□□□ -0.84
MSI2-208	ENST00000579466	LRRK1	Q38SD2	2015 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	IGLON5	A6NGN9	336 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	CAPN8	A6NHC0	703 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	GOLGA8S	H3BPF8	625 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	TNFSF15	O95150	251 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	CSF2	P04141	144 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	C6	P13671	934 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	ITGB7	P26010	798 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	L1CAM	P32004	1257 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	KRT9	P35527	623 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	PPP1R2	P41236	205 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	RABIF	P47224	123 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	SERPINH1	P50454	418 aa	Known RBP	9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	CLCN6	P51797	869 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	THOP1	P52888	689 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	ARF5	P84085	180 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	EIF2B5	Q13144	721 aa	Known RBP	9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	SGCG	Q13326	291 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms