RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 BYSLQ13895 437 aaKnown RBP33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 LBRQ14739 615 aaKnown RBP33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 PDK1Q15118 436 aa33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 FATE1Q969F0 183 aa33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 GDAP1L1Q96MZ0 367 aa33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 CINPQ9BW66 212 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 USP36Q9P275 1121 aaKnown RBP33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 PPM1HQ9ULR3 514 aa33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 PPP1R12AO14974 1030 aaPredicted RBP33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 ADH1BP00325 375 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 CHRNA3P32297 505 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 P2RY2P41231 377 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 SLC10A7Q0GE19 358 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 TTC31Q49AM3 519 aaPredicted RBP33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 AADACL2Q6P093 401 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 CCNYQ8ND76 341 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 GAB3Q8WWW8 586 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 P3H4Q92791 437 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 ITM2CQ9NQX7 267 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 HECAQ9UBI9 543 aaPredicted RBP33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 LHX3Q9UBR4 397 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 SEPT3Q9UH03 358 aa33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 ARIH1Q9Y4X5 557 aaPredicted RBP33.64■■■□□ 2.98
CTDNEP1-209ENST00000574205 APOC4-APOC2K7ER74 178 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 IGSF6O95976 241 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 APOC2P02655 101 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 ZNF33AQ06730 810 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 FAM46CQ5VWP2 391 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 CHST14Q8NCH0 376 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 SPACA7Q96KW9 195 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 PSKH2Q96QS6 385 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 HEPHQ9BQS7 1158 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 HERPUD2Q9BSE4 406 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 IL36AQ9UHA7 158 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 R4GN57 208 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 USP27XA6NNY8 438 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 C1QTNF3-AMACRE9PGA6 284 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 RPP40O75818 363 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 TJP3O95049 919 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 PRNPP04156 253 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 CTSLP07711 333 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 PSMD8P48556 350 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 TPMTP51580 245 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 PPIDQ08752 370 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 HNRNPDQ14103 355 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 MAP7D1Q3KQU3 841 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 MARC1Q5VT66 337 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 BBS5Q8N3I7 341 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 TSEN2Q8NCE0 465 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 TMIEQ8NEW7 156 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 PIP4K2CQ8TBX8 421 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 RLN3Q8WXF3 142 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 LGMNQ99538 433 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 TLR10Q9BXR5 811 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 BRD8Q9H0E9 1235 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 SAE1Q9UBE0 346 aaPredicted RBP33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 SARDHQ9UL12 918 aa33.63■■■□□ 2.97
CTDNEP1-209ENST00000574205 MATN3O15232 486 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 HRO43593 1189 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 KIF5CO60282 957 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 PECAM1P16284 738 aaPredicted RBP33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 C5AR1P21730 350 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 MSNP26038 577 aaKnown RBP33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 SLC8A1P32418 973 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 SFSWAPQ12872 951 aaKnown RBP33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 ZNF235Q14590 738 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 ATXN7L2Q5T6C5 722 aaPredicted RBP33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 RYBPQ8N488 228 aaPredicted RBP33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 CARD9Q9H257 536 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 PABPC3Q9H361 631 aaKnown RBP33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 CD93Q9NPY3 652 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 JRKLQ9Y4A0 524 aa33.62■■■□□ 2.97
CTDNEP1-209ENST00000574205 MID1O15344 667 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 POP4O95707 220 aaKnown RBP33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 IGLV3-19P01714 112 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 RENBPP51606 427 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 CCDC181Q5TID7 509 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 CCDC13Q8IYE1 715 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 GRIN3AQ8TCU5 1115 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 MAML1Q92585 1016 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 LRIG1Q96JA1 1093 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 EXOC2Q96KP1 924 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 CYP8B1Q9UNU6 501 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 WASF2Q9Y6W5 498 aa33.61■■■□□ 2.97
CTDNEP1-209ENST00000574205 HSPA9P38646 679 aaKnown RBP33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 RAD51Q06609 339 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 NSUN2Q08J23 767 aaKnown RBP eCLIP33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 SRSF5Q13243 272 aaKnown RBP33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 MYLK3Q32MK0 819 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 ZNF569Q5MCW4 686 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 SEL1L2Q5TEA6 688 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 USP30Q70CQ3 517 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 TEX26Q8N6G2 289 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 OR6K2Q8NGY2 324 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 ZDHHC6Q9H6R6 413 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 RAPGEFL1Q9UHV5 662 aa33.6■■■□□ 2.97
CTDNEP1-209ENST00000574205 LEFTY1O75610 366 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 MMP13P45452 471 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 ARSIQ5FYB1 569 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 KBTBD6Q86V97 674 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms