RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KCNK1O00180 336 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MCF2LO15068 1137 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 ALDH1A2O94788 518 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 IGSF6O95976 241 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 RBP3P10745 1247 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 CASQ1P31415 396 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MMP13P45452 471 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 ATP5OP48047 213 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 COPAP53621 1224 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 ZNF235Q14590 738 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 SYT10Q6XYQ8 523 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 DPY19L3Q6ZPD9 716 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MAML2Q8IZL2 1156 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 OR2AP1Q8NGE2 309 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MAIP1Q8WWC4 291 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MS4A14Q96JA4 679 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 QKIQ96PU8 341 aaKnown RBP eCLIP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 FAM129BQ96TA1 746 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MKRN2Q9H000 416 aaKnown RBP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 RSPH9Q9H1X1 276 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 RBM22Q9NW64 420 aaKnown RBP eCLIP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 HECAQ9UBI9 543 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 TTC7AQ9ULT0 858 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-224ENST00000568877 SAR1BQ9Y6B6 198 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 ATG2BQ96BY7 2078 aa17.01■□□□□ 0.31
COMMD4-224ENST00000568877 MUSKO15146 869 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 ALOX15BO15296 676 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 MTSS1O43312 755 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 JCHAINP01591 159 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 GABRG2P18507 467 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 HOXA6P31267 233 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 HSPA9P38646 679 aaKnown RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 NSUN2Q08J23 767 aaKnown RBP eCLIP17■□□□□ 0.31
COMMD4-224ENST00000568877 SIX1Q15475 284 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 ATXN7L2Q5T6C5 722 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 ANO7Q6IWH7 933 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 TSSK4Q6SA08 328 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 ZSCAN30Q86W11 494 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 RASSF3Q86WH2 238 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 TMPRSS6Q8IU80 811 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 CDKL3Q8IVW4 592 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 RYBPQ8N488 228 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 CHST14Q8NCH0 376 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 HMGB4Q8WW32 186 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 EXOC2Q96KP1 924 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 MRGPRX1Q96LB2 322 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 GDAP1L1Q96MZ0 367 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 IL12RB2Q99665 862 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 FRMD8P1Q9BZ68 369 aaPredicted RBP17■□□□□ 0.31
COMMD4-224ENST00000568877 SEPT10Q9P0V9 454 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 EBF1Q9UH73 591 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 FBXO4Q9UKT5 387 aa17■□□□□ 0.31
COMMD4-224ENST00000568877 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 ZNF185O15231 689 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 RNASEH1O60930 286 aaKnown RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 NEBLO76041 1014 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 POP4O95707 220 aaKnown RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 C7P10643 843 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 TDGF1P13385 188 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 NDUFV2P19404 249 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 RBL1P28749 1068 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 CHRNA3P32297 505 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 RGRP47804 291 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 CSNK1DP48730 415 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 RPS14P62263 151 aaKnown RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 ZBTB17Q13105 803 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 MYLK3Q32MK0 819 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 ZNF776Q68DI1 518 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 DARS2Q6PI48 645 aaKnown RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 DSG4Q86SJ6 1040 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 MMAAQ8IVH4 418 aaKnown RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 PGBD3Q8N328 593 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 PGBD5Q8N414 524 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 MDGA1Q8NFP4 955 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 OR6K2Q8NGY2 324 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 SLC35B2Q8TB61 432 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 ACTRT1Q8TDG2 376 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 C1orf54Q8WWF1 131 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 HTR3CQ8WXA8 447 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 ATG4AQ8WYN0 398 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 PRCCQ92733 491 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 SIPA1Q96FS4 1042 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 ZNF419Q96HQ0 510 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 NAP1L3Q99457 506 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 MGME1Q9BQP7 344 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 HEPHQ9BQS7 1158 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 SLC6A17Q9H1V8 727 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 C10orf88Q9H8K7 445 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 NT5MQ9NPB1 228 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 HAUS2Q9NVX0 235 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 BCCIPQ9P287 314 aaKnown RBP eCLIP16.99■□□□□ 0.31
COMMD4-224ENST00000568877 IL36AQ9UHA7 158 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 AMACRQ9UHK6 382 aa16.99■□□□□ 0.31
COMMD4-224ENST00000568877 PPM1HQ9ULR3 514 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms