RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	SMAD6	O43541	496 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	SYNCRIP	O60506	623 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	EPHX1	P07099	455 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	CES1	P23141	567 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	PRKCH	P24723	683 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	STIP1	P31948	543 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	CHRNA3	P32297	505 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	CSNK1D	P48730	415 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	NUMB	P49757	651 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	SLC10A7	Q0GE19	358 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	FZD5	Q13467	585 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	ELAVL3	Q14576	367 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	GRM3	Q14832	879 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	EMC10	Q5UCC4	262 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	ALG1L	Q6GMV1	187 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	SYT13	Q7L8C5	426 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	DSG4	Q86SJ6	1040 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	SPEM1	Q8N4L4	309 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	TXNDC5	Q8NBS9	432 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	OR2AP1	Q8NGE2	309 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	GRK7	Q8WTQ7	553 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	FRS2	Q8WU20	508 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	C1orf54	Q8WWF1	131 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	RTP4	Q96DX8	246 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	PPP1R2P1	Q96PQ5	205 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	ACOX2	Q99424	681 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	FAM118B	Q9BPY3	351 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	MGME1	Q9BQP7	344 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	POLR1E	Q9GZS1	481 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	TRHDE	Q9UKU6	1024 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	ZNF148	Q9UQR1	794 aa		12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	DRG1	Q9Y295	367 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	FCF1	Q9Y324	198 aa	Known RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	MTF2	Q9Y483	593 aa	Predicted RBP	12.2	□□□□□ -0.46
FANCA-231	ENST00000568626	TTC34	A8MYJ7	566 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626		K7ERQ8	282 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	SGK1	O00141	431 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	KCNN4	O15554	427 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	ZBTB24	O43167	697 aa	Predicted RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	OPHN1	O60890	802 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	ADAM23	O75077	832 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	PTPN3	P26045	913 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	RBL1	P28749	1068 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	HOXD11	P31277	338 aa	Predicted RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	ACTN2	P35609	894 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	DGKE	P52429	567 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	AP1S1	P61966	158 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	RAD51	Q06609	339 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	ZBTB17	Q13105	803 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	CAMK2G	Q13555	558 aa	Predicted RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	CYTH1	Q15438	398 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	P3H1	Q32P28	736 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	TEX44	Q53QW1	395 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	CARD16	Q5EG05	197 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	ITPRIPL1	Q6GPH6	555 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	LEKR1	Q6ZMV7	388 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	MAMSTR	Q6ZN01	415 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626		Q6ZS52	159 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626		Q6ZVU0	165 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	MNS1	Q8NEH6	495 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	OR8D1	Q8WZ84	308 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	MAGOHB	Q96A72	148 aa	Known RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	LRIG1	Q96JA1	1093 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	TEKT5	Q96M29	485 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	SPATA13	Q96N96	652 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	AP1M1	Q9BXS5	423 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.19	□□□□□ -0.46	2e-7	■■■■■ 26.8
FANCA-231	ENST00000568626	SMARCAL1	Q9NZC9	954 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	SEPT10	Q9P0V9	454 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	LHX3	Q9UBR4	397 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	MRFAP1	Q9Y605	127 aa		12.19	□□□□□ -0.46
FANCA-231	ENST00000568626	C5orf60	A6NFR6	353 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	WASH3P	C4AMC7	463 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	PDE2A	O00408	941 aa	Predicted RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	RNASEH1	O60930	286 aa	Known RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	SIN3B	O75182	1162 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	ZNF821	O75541	412 aa	Predicted RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	PAPSS2	O95340	614 aa	Predicted RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	GAS8	O95995	478 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	PDGFB	P01127	241 aa	Predicted RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	JCHAIN	P01591	159 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	HLA-DQB2	P05538	268 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	HLA-E	P13747	358 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	CCR3	P51677	355 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	CCNH	P51946	323 aa	Predicted RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	WASHC5	Q12768	1159 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	SNX1	Q13596	522 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	SLC14A2	Q15849	920 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	CRY1	Q16526	586 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	C9orf64	Q5T6V5	341 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	CCDC137	Q6PK04	289 aa	Known RBP	12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	C4orf22	Q6V702	233 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	FBXL6	Q8N531	539 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	CCDC89	Q8N998	374 aa		12.18	□□□□□ -0.46
FANCA-231	ENST00000568626	FAM71D	Q8N9W8	422 aa		12.18	□□□□□ -0.46

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