RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SYNJ2O15056 1496 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 IGSF1Q8N6C5 1336 aa3.46□□□□□ -1.85
HERPUD1-211ENST00000566550 FER1L4A9Z1Z3 1794 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 A0A1W2PRX2 142 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 SYCE3A1L190 88 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 LRRD1A4D1F6 860 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 F5H697 171 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 H3BQ06 376 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 QSOX1O00391 747 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 NDC80O14777 642 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FFAR3O14843 346 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ADAMDEC1O15204 470 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 HOXA3O43365 443 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 HS6ST1O60243 411 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 PRPSAP2O60256 369 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 HBP1O60381 514 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 SOCS5O75159 536 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 SEC22BO75396 215 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ERN1O75460 977 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 IPO13O94829 963 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 CAMTA2O94983 1202 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 CBX6O95503 412 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ALDOAP04075 364 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ITGB3P05106 788 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FYNP06241 537 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ARSAP15289 507 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ATF2P15336 505 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 CD19P15391 556 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FERP16591 822 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF8P17098 575 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 PPIFP30405 207 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 IL13P35225 146 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 PTPN9P43378 593 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 PIP4K2AP48426 406 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 NDUFV1P49821 464 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF132P52740 706 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 MVDP53602 400 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ADAM8P78325 824 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TIAL1Q01085 375 aaKnown RBP eCLIP3.46□□□□□ -1.865e-7■■■■□ 24.5
HERPUD1-211ENST00000566550 SP2Q02086 613 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 NIPAL4Q0D2K0 466 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 RALGDSQ12967 914 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 CLCA4Q14CN2 919 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TAF7Q15545 349 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TBR1Q16650 682 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 WSCD2Q2TBF2 565 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FBXO43Q4G163 708 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 AASDHQ4L235 1098 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ZRANB3Q5FWF4 1079 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 RBM20Q5T481 1227 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM90A2PQ658T7 463 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 WDR93Q6P2C0 686 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ABRAXAS1Q6UWZ7 409 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 DPY19L3Q6ZPD9 716 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 USP30Q70CQ3 517 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 GSTA5Q7RTV2 222 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ADCK2Q7Z695 626 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 AACSQ86V21 672 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 KLHL7Q8IXQ5 586 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TBC1D21Q8IYX1 336 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ABRAQ8N0Z2 381 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD35Q8N283 1001 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 MINDY1Q8N5J2 469 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 MB21D1Q8N884 522 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 IQUBQ8NA54 791 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 KYQ8NBH2 561 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 DNAAF1Q8NEP3 725 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 IPMKQ8NFU5 416 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 NEK11Q8NG66 645 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 SPATA20Q8TB22 786 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FNIP1Q8TF40 1166 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 MMABQ96EY8 250 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TRMT61AQ96FX7 289 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 RBM18Q96H35 190 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 PGAM5Q96HS1 289 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 DCLRE1CQ96SD1 692 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 MGME1Q9BQP7 344 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 CPPED1Q9BRF8 314 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 KIFC3Q9BVG8 833 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 NPLQ9BXD5 320 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 CARD11Q9BXL7 1154 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 WDR11Q9BZH6 1224 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ENKD1Q9H0I2 346 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ABCG8Q9H221 673 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 HRH4Q9H3N8 390 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 KIF9Q9HAQ2 790 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 USP29Q9HBJ7 922 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 MAGEE1Q9HCI5 957 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 KCNK9Q9NPC2 374 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 ABCB8Q9NUT2 735 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 BABAM1Q9NWV8 329 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 VSX1Q9NZR4 365 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 RABL2AQ9UBK7 228 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 AMACRQ9UHK6 382 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 TUBE1Q9UJT0 475 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 FBXL5Q9UKA1 691 aa3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 NAP1L2Q9ULW6 460 aaPredicted RBP3.46□□□□□ -1.86
HERPUD1-211ENST00000566550 COG5Q9UP83 839 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms