RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TTC7AQ9ULT0 858 aaPredicted RBP12.68□□□□□ -0.38
KARS-204ENST00000564578 SHROOM3Q8TF72 1996 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 MCF2LO15068 1137 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 SYNCRIPO60506 623 aaKnown RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 GJB3O75712 270 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 CCNB1P14635 433 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 AP1B1Q10567 949 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 ZBTB17Q13105 803 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 XRCC4Q13426 336 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 ATXN7L2Q5T6C5 722 aaPredicted RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 MARC1Q5VT66 337 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 TIGD7Q6NT04 549 aaPredicted RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 STK40Q8N2I9 435 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 CNTD1Q8N815 330 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 CHST14Q8NCH0 376 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 MDGA1Q8NFP4 955 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 OR2AP1Q8NGE2 309 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 SLC35B2Q8TB61 432 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 TFB1MQ8WVM0 346 aaKnown RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 ATG4AQ8WYN0 398 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 EXOC2Q96KP1 924 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 MRGPRX1Q96LB2 322 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 BRD8Q9H0E9 1235 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 RSPH9Q9H1X1 276 aaPredicted RBP12.67□□□□□ -0.38
KARS-204ENST00000564578 SLC8A2Q9UPR5 921 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 KMT2EQ8IZD2 1858 aa12.67□□□□□ -0.38
KARS-204ENST00000564578 TCRBV21S2A2A0A5A6 115 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CES2O00748 559 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 BNIP3LO60238 219 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CTSLP07711 333 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 RBP3P10745 1247 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 TCP1P17987 556 aaKnown RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 GABRG2P18507 467 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 GKP32189 559 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 PXNP49023 591 aaPredicted RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 RENBPP51606 427 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 NRLP54845 237 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 EIF3EP60228 445 aaKnown RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 RHOAP61586 193 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 ELAVL3Q14576 367 aaKnown RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 STARD3Q14849 445 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 SLC45A4Q5BKX6 768 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CARD16Q5EG05 197 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 RASSF3Q86WH2 238 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CREG2Q8IUH2 290 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 TTC13Q8NBP0 860 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 OR6K2Q8NGY2 324 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 QKIQ96PU8 341 aaKnown RBP eCLIP12.66□□□□□ -0.38
KARS-204ENST00000564578 IL12RB2Q99665 862 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 USP29Q9HBJ7 922 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 SARDHQ9UL12 918 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 DNPEPQ9ULA0 475 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 LAMTOR5O43504 91 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 JCHAINP01591 159 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 NDUFV2P19404 249 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CR2P20023 1033 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 RBL1P28749 1068 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 HOXA6P31267 233 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 MMP13P45452 471 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 METAP1P53582 386 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 IFI35P80217 286 aaPredicted RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 NSUN2Q08J23 767 aaKnown RBP eCLIP12.66□□□□□ -0.38
KARS-204ENST00000564578 DMWDQ09019 674 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 IHHQ14623 411 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 LONRF2Q1L5Z9 754 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 ANO7Q6IWH7 933 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 TMPRSS6Q8IU80 811 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 TSTD1Q8NFU3 115 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 OR2T3Q8NH03 318 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 CEP41Q9BYV8 373 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 RBM22Q9NW64 420 aaKnown RBP eCLIP12.66□□□□□ -0.386e-8■■□□□ 13.5
KARS-204ENST00000564578 HECAQ9UBI9 543 aaPredicted RBP12.66□□□□□ -0.38
KARS-204ENST00000564578 SEPT3Q9UH03 358 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 PPM1HQ9ULR3 514 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 WASF2Q9Y6W5 498 aa12.66□□□□□ -0.38
KARS-204ENST00000564578 WDR87Q6ZQQ6 2873 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 FRYLO94915 3013 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 TTC24A2A3L6 582 aaPredicted RBP12.65□□□□□ -0.38
KARS-204ENST00000564578 HACD1B0YJ81 288 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 INSIG1O15503 277 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 LIASO43766 372 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 GSRP00390 522 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 MAXP61244 160 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 OASLQ15646 514 aaKnown RBP12.65□□□□□ -0.38
KARS-204ENST00000564578 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 MMAAQ8IVH4 418 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms