RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ERCC2P18074 760 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 CCNHP51946 323 aaPredicted RBP28.81■■■□□ 2.2
NME3-203ENST00000563367 UAP1L1Q3KQV9 507 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 BOLA3Q53S33 107 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 CPNE8Q86YQ8 564 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 CNGA4Q8IV77 575 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 NETO2Q8NC67 525 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 HSPH1Q92598 858 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 SPTLC3Q9NUV7 552 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 ZSCAN5CA6NGD5 496 aaPredicted RBP28.8■■■□□ 2.2
NME3-203ENST00000563367 DAPK3O43293 454 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 PLRG1O43660 514 aaKnown RBP28.8■■■□□ 2.2
NME3-203ENST00000563367 SYPP08247 313 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 H2AFZP0C0S5 128 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 RARAP10276 462 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 HCAR3P49019 387 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 NDST2P52849 883 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 TAS2R38P59533 333 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 PPP2CBP62714 309 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 PPP2CAP67775 309 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 BNC1Q01954 994 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 SLC25A11Q02978 314 aaKnown RBP28.8■■■□□ 2.2
NME3-203ENST00000563367 GRIK2Q13002 908 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 DPYSQ14117 519 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 DPYSL2Q16555 572 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 PIP5KL1Q5T9C9 394 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 H2AFVQ71UI9 128 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 CTNNBL1Q8WYA6 563 aaPredicted RBP28.8■■■□□ 2.2
NME3-203ENST00000563367 CCDC42Q96M95 316 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 HEPHQ9BQS7 1158 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 SLC39A8Q9C0K1 460 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 TM9SF3Q9HD45 589 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 CTTNBP2NLQ9P2B4 639 aa28.8■■■□□ 2.2
NME3-203ENST00000563367 HECAQ9UBI9 543 aaPredicted RBP28.8■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3DA0A087WVF3 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3IA0A087WXS9 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3EA0A087X179 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3KA0A087X1G2 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3FA6NER0 549 aaPredicted RBP28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3LB9A6J9 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TMCC1O94876 653 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3HP0C7X1 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 CSNK1EP49674 416 aaKnown RBP28.79■■■□□ 2.2
NME3-203ENST00000563367 CCR5P51681 352 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 AFMIDQ63HM1 303 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3GQ6DHY5 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3CQ6IPX1 549 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 PLPP6Q8IY26 295 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 TBC1D3Q8IZP1 549 aaPredicted RBP28.79■■■□□ 2.2
NME3-203ENST00000563367 MINDY1Q8N5J2 469 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 NPWQ8N729 165 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 OR6K2Q8NGY2 324 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 VOPP1Q96AW1 172 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 OSGEPQ9NPF4 335 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.79■■■□□ 2.2
NME3-203ENST00000563367 DONSONQ9NYP3 566 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 UVRAGQ9P2Y5 699 aa28.79■■■□□ 2.2
NME3-203ENST00000563367 A0A1W2PPC4 97 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 GKP32189 559 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 ZNF135P52742 658 aaPredicted RBP28.78■■■□□ 2.2
NME3-203ENST00000563367 ATXN3P54252 364 aaPredicted RBP28.78■■■□□ 2.2
NME3-203ENST00000563367 ATXN7L2Q5T6C5 722 aaPredicted RBP28.78■■■□□ 2.2
NME3-203ENST00000563367 POLNQ7Z5Q5 900 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 ARHGAP12Q8IWW6 846 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 TC2NQ8N9U0 490 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 TEKT4Q8WW24 435 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 KDM4CQ9H3R0 1056 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 PDFQ9HBH1 243 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 MFHAS1Q9Y4C4 1052 aa28.78■■■□□ 2.2
NME3-203ENST00000563367 A0A1B0GVT2 93 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 J3KR12 359 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 GSRP00390 522 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 TMEM253P0C7T8 217 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 PAPOLAP51003 745 aaKnown RBP28.77■■■□□ 2.2
NME3-203ENST00000563367 ZNF75DP51815 510 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 AFF3P51826 1226 aaKnown RBP28.77■■■□□ 2.2
NME3-203ENST00000563367 LAYNQ6UX15 382 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 RYBPQ8N488 228 aaPredicted RBP28.77■■■□□ 2.2
NME3-203ENST00000563367 OR2AP1Q8NGE2 309 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 ZDHHC6Q9H6R6 413 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 TRPM6Q9BX84 2022 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 SHROOM3Q8TF72 1996 aa28.77■■■□□ 2.2
NME3-203ENST00000563367 PCNX2A6NKB5 2137 aa28.76■■■□□ 2.2
NME3-203ENST00000563367 H3BRJ5 948 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 AMPD1P23109 780 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 CYTH1Q15438 398 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 INO80DQ53TQ3 878 aaPredicted RBP28.76■■■□□ 2.19
NME3-203ENST00000563367 PPM1JQ5JR12 505 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 ERN2Q76MJ5 926 aaKnown RBP28.76■■■□□ 2.19
NME3-203ENST00000563367 TP53INP2Q8IXH6 220 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 CASKIN2Q8WXE0 1202 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 SLC6A18Q96N87 628 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 HDAC8Q9BY41 377 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 DYRK4Q9NR20 520 aa28.76■■■□□ 2.19
NME3-203ENST00000563367 ANKRD36A6QL64 1941 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 MED19A0JLT2 244 aaPredicted RBP28.75■■■□□ 2.19
NME3-203ENST00000563367 WNT9AO14904 365 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 LATO43561 262 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 PRAMEF11O60813 436 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 PROSCO94903 275 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms