RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CALR3Q96L12 384 aaKnown RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF670Q9BS34 389 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 CEP44Q9C0F1 390 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 SLC39A8Q9C0K1 460 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 PDFQ9HBH1 243 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ETNK2Q9NVF9 386 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 PPM1HQ9ULR3 514 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 SCML1Q9UN30 329 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 SMG5Q9UPR3 1016 aaKnown RBP6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ACTL7AQ9Y615 435 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 ALG6Q9Y672 507 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 DUSP10Q9Y6W6 482 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 OTOGLQ3ZCN5 2332 aa6.31□□□□□ -1.4
CNOT1-204ENST00000563130 C3orf70A6NLC5 250 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF487B1APH4 448 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 LCE2BO14633 110 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ALOX15BO15296 676 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CAPN5O15484 640 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ARHGAP6O43182 974 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 COMTP21964 271 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 AMPD1P23109 780 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 KDELR1P24390 212 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 WDR4P57081 412 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 GEMIN4P57678 1058 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 BYSLQ13895 437 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF776Q68DI1 518 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 C11orf63Q6NUN7 778 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 C22orf39Q6P5X5 142 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 Q6ZVU0 165 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 LRRC8AQ8IWT6 810 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 TP53INP2Q8IXH6 220 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 STK40Q8N2I9 435 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PCDH20Q8N6Y1 951 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ATP11CQ8NB49 1132 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 TPCN2Q8NHX9 752 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PCDH19Q8TAB3 1148 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CASKIN2Q8WXE0 1202 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 RAPGEF5Q92565 580 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CELF6Q96J87 481 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 LOXL4Q96JB6 756 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 GOLPH3Q9H4A6 298 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 WSB2Q9NYS7 404 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 INVSQ9Y283 1065 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 MFHAS1Q9Y4C4 1052 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 A0A0U1RQJ8 604 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 TMEM110-MUSTN1A8MSY1 372 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ST8SIA5O15466 376 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 DAPK3O43293 454 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PRAMEF11O60813 436 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 TGM1P22735 817 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CD6P30203 668 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 SSR1P43307 286 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 NOP2P46087 812 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PAPOLAP51003 745 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CCZ1BP86790 482 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CCZ1P86791 482 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PAFAH1B3Q15102 231 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CST6Q15828 149 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 TAZQ16635 292 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ACCSLQ4AC99 568 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ANKRD20A8PQ5CZ79 823 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 TMCO3Q6UWJ1 677 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 KIAA1324Q6UXG2 1013 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 DPY19L3Q6ZPD9 716 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PRR23BQ6ZRT6 265 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 USP30Q70CQ3 517 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CEP68Q76N32 757 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 MMAAQ8IVH4 418 aaKnown RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 MAP7D3Q8IWC1 876 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 RHOT1Q8IXI2 618 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PQLC3Q8N755 202 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 LRRC57Q8N9N7 239 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CCDC112Q8NEF3 446 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF419Q96HQ0 510 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-204ENST00000563130 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 DESI2Q9BSY9 194 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 SARDHQ9UL12 918 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 HPCAL4Q9UM19 191 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 HYOU1Q9Y4L1 999 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ABCA7Q8IZY2 2146 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 PIEZO1Q92508 2521 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 NUP205Q92621 2012 aa6.3□□□□□ -1.4
CNOT1-204ENST00000563130 ARHGAP42A6NI28 874 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ESPNB1AK53 854 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 J3KR12 359 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RNF103O00237 685 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PSTPIP1O43586 416 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 BUB1O43683 1085 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RNASEH1O60930 286 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PEX11BO96011 259 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 DNTTP04053 509 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CTSLP07711 333 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 C5AR1P21730 350 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 OXTRP30559 389 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SLC8A1P32418 973 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SERPINB6P35237 376 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 DRD3P35462 400 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms