RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 IMPACTQ9P2X3 320 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 PCDHGA5Q9Y5G8 931 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 TMEM131Q92545 1883 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 LRRK1Q38SD2 2015 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 FAM47DPA6NHR8 397 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 DFFAO00273 331 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 MUSKO15146 869 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 ALOX15BO15296 676 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 LEFTY1O75610 366 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 MAP3K6O95382 1288 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 PEX11BO96011 259 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 ADH1BP00325 375 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 IGHV4-34P06331 123 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 KDELR1P24390 212 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 CYLC1P35663 651 aaPredicted RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 ARL4AP40617 200 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 ARHGAP25P42331 645 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 CCNHP51946 323 aaPredicted RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 HADHBP55084 474 aaKnown RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 SLC10A2Q12908 348 aaPredicted RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 KRT81Q14533 505 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 HADHQ16836 314 aaKnown RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 SPDYCQ5MJ68 293 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 PIP5KL1Q5T9C9 394 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 AGBL4Q5VU57 503 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 NCBP2-AS2Q69YL0 99 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 NCEH1Q6PIU2 408 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 SYT12Q8IV01 421 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 DNASE2BQ8WZ79 361 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 ISG20Q96AZ6 181 aaKnown RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 BIRC7Q96CA5 298 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 FAF2Q96CS3 445 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 OMDQ99983 421 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 DESI2Q9BSY9 194 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 BTBD1Q9H0C5 482 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 HECAQ9UBI9 543 aaPredicted RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 TRIM10Q9UDY6 481 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 IL36AQ9UHA7 158 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 EIF2B4Q9UI10 523 aaKnown RBP14.14□□□□□ -0.15
TPM1-230ENST00000561266 HPCAL4Q9UM19 191 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 DNAH14Q0VDD8 3507 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 TRPM6Q9BX84 2022 aa14.14□□□□□ -0.15
TPM1-230ENST00000561266 ASCC3Q8N3C0 2202 aaKnown RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 CXorf51AA0A1B0GTR3 108 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 WNT9AO14904 365 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 MFSD11O43934 449 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 LRP3O75074 770 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 TNNT1P13805 278 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 NOP2P46087 812 aaKnown RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 MARCKSL1P49006 195 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 ZNF135P52742 658 aaPredicted RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 ADPRHP54922 357 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 PPP2CBP62714 309 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 PPP2CAP67775 309 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 BNC1Q01954 994 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 MYLK3Q32MK0 819 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 TMIEQ8NEW7 156 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 CADM4Q8NFZ8 388 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 HEPHQ9BQS7 1158 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 ANP32EQ9BTT0 268 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 CALN1Q9BXU9 219 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 ZDHHC6Q9H6R6 413 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 SGK2Q9HBY8 427 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 VPS45Q9NRW7 570 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 UBA2Q9UBT2 640 aaPredicted RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 EVLQ9UI08 416 aaPredicted RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 IPO11Q9UI26 975 aaKnown RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 SCML1Q9UN30 329 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.13□□□□□ -0.15
TPM1-230ENST00000561266 ALG6Q9Y672 507 aa14.13□□□□□ -0.15
TPM1-230ENST00000561266 LNP1A1A4G5 178 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 ARHGAP42A6NI28 874 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 KPNA3O00505 521 aaPredicted RBP14.12□□□□□ -0.15
TPM1-230ENST00000561266 SPINT1O43278 529 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 MAFKO60675 156 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 FSBPO95073 299 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 GSRP00390 522 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 ITIH2P19823 946 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 SLC10A7Q0GE19 358 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 SPA17Q15506 151 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 INO80DQ53TQ3 878 aaPredicted RBP14.12□□□□□ -0.15
TPM1-230ENST00000561266 TMCO3Q6UWJ1 677 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 PLPP6Q8IY26 295 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 RGL4Q8IZJ4 473 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 PGBD5Q8N414 524 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 TSEN2Q8NCE0 465 aaKnown RBP14.12□□□□□ -0.15
TPM1-230ENST00000561266 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 OR2I1PQ8NGU4 316 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 OR14C36Q8NHC7 312 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 TPCN2Q8NHX9 752 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 FZD4Q9ULV1 537 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 NCKAP1Q9Y2A7 1128 aa14.12□□□□□ -0.15
TPM1-230ENST00000561266 A0A0A6YYK5 440 aaPredicted RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 ZSCAN5CA6NGD5 496 aaPredicted RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 MEI4A8MW99 385 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms