RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 C5AR1P21730 350 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 CHRNA3P32297 505 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 CETN2P41208 172 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 RECQLP46063 649 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PXNP49023 591 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 TPMTP51580 245 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 SNRPD1P62314 119 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 GBE1Q04446 702 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 ADCY2Q08462 1091 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PPIDQ08752 370 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 SFSWAPQ12872 951 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PDK1Q15118 436 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 CST6Q15828 149 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 SPDYCQ5MJ68 293 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 FAM46CQ5VWP2 391 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 HEATR6Q6AI08 1181 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 DPY19L3Q6ZPD9 716 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 ARHGAP36Q6ZRI8 547 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 KBTBD6Q86V97 674 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 RFX6Q8HWS3 928 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PGBD3Q8N328 593 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 MAML1Q92585 1016 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 ALS2CR12Q96Q35 445 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 CPEB1Q9BZB8 566 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 OSBPL8Q9BZF1 889 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 EPC1Q9H2F5 836 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PABPC3Q9H361 631 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 SP110Q9HB58 689 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 BCCIPQ9P287 314 aaKnown RBP eCLIP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 LHX3Q9UBR4 397 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 WASF2Q9Y6W5 498 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 CACNA1EQ15878 2313 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 IGHV1OR15-9A0A0B4J2B8 117 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 GOLGA6L9A6NEM1 432 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 APOC4-APOC2K7ER74 178 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 MATN3O15232 486 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 RPP40O75818 363 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 POP4O95707 220 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 APOC2P02655 101 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 DNTTP04053 509 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 CTSLP07711 333 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 ACADMP11310 421 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 CR2P20023 1033 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 OXTRP30559 389 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SLC8A1P32418 973 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 HSPA9P38646 679 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 RENBPP51606 427 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 CCNHP51946 323 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 NHLH1Q02575 133 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SLC10A7Q0GE19 358 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 XRCC4Q13426 336 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 LBRQ14739 615 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 GRM3Q14832 879 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 MYLK3Q32MK0 819 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 RALGPS1Q5JS13 557 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 DCAF12L1Q5VU92 463 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 ALG1LQ6GMV1 187 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SLC36A4Q6YBV0 504 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 LEKR1Q6ZMV7 388 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 ZNF354CQ86Y25 554 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 MMAAQ8IVH4 418 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 ATPAF2Q8N5M1 289 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SUMF1Q8NBK3 374 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 NETO2Q8NC67 525 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 TSEN2Q8NCE0 465 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 PIP4K2CQ8TBX8 421 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 HCAR2Q8TDS4 363 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 P3H4Q92791 437 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 ATOH1Q92858 354 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 GDAP1L1Q96MZ0 367 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 HEPHQ9BQS7 1158 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 HERPUD2Q9BSE4 406 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 TLR10Q9BXR5 811 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 OSBPL1AQ9BXW6 950 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 TPSD1Q9BZJ3 242 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 PCED1AQ9H1Q7 454 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SLC6A17Q9H1V8 727 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 CARD9Q9H257 536 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 TNKS2Q9H2K2 1166 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 WSB2Q9NYS7 404 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 HECAQ9UBI9 543 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 IL36AQ9UHA7 158 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 SARDHQ9UL12 918 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 FZD4Q9ULV1 537 aa9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 PACSIN2Q9UNF0 486 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-221ENST00000561055 OTOGLQ3ZCN5 2332 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 C1QTNF3-AMACRE9PGA6 284 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 PPP1R12AO14974 1030 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 MID1O15344 667 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC7A4O43246 635 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 TJP3O95049 919 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 IGSF6O95976 241 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 IL1BP01584 269 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 CD6P30203 668 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 DRD3P35462 400 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms