RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 EMC10Q5UCC4 262 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 TIGD7Q6NT04 549 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 TTC27Q6P3X3 843 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 C22orf39Q6P5X5 142 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 TRIM67Q6ZTA4 783 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 ZNF572Q7Z3I7 529 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 ZC3H18Q86VM9 953 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 ZNF354CQ86Y25 554 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 LRRC49Q8IUZ0 686 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 CDKL3Q8IVW4 592 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 CCDC13Q8IYE1 715 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 PGBD5Q8N414 524 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 ZNF513Q8N8E2 541 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 C12orf50Q8NA57 414 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 KDM1BQ8NB78 822 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 USP33Q8TEY7 942 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 FRS2Q8WU20 508 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 TFB1MQ8WVM0 346 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 MAIP1Q8WWC4 291 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 C1orf54Q8WWF1 131 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 NKD2Q969F2 451 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 EXOC4Q96A65 974 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 VOPP1Q96AW1 172 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 SHDQ96IW2 340 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 RPL10LQ96L21 214 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 ZNF599Q96NL3 588 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 TSGA13Q96PP4 275 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 ACOX2Q99424 681 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 SPON2Q9BUD6 331 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 AP1M1Q9BXS5 423 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 FRMD8P1Q9BZ68 369 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 C10orf88Q9H8K7 445 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 CD248Q9HCU0 757 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 THAP10Q9P2Z0 257 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 LHX3Q9UBR4 397 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 UBA2Q9UBT2 640 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 SLC25A13Q9UJS0 675 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
CTDSPL2-210ENST00000560834 MYLKQ15746 1914 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 A0A0C4DFX4 3053 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 BCLAF3A2AJT9 711 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 TMEM221A6NGB7 291 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 TTC34A8MYJ7 566 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 H7C0C1 242 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 M0R296 226 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 KCNK1O00180 336 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 MATN3O15232 486 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 TIMM44O43615 452 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 ADAM23O75077 832 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 PHF2O75151 1096 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 URI1O94763 535 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 HLA-DQB2P05538 268 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 ATP5BP06576 529 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 HLA-EP13747 358 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 CR2P20023 1033 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 PTPN3P26045 913 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 RBL1P28749 1068 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 RGRP47804 291 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 ATP5OP48047 213 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 GDF10P55107 478 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 GEMIN4P57678 1058 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 MRPS21P82921 87 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 SLC10A7Q0GE19 358 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 AP1B1Q10567 949 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 WASHC5Q12768 1159 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 LRRC32Q14392 662 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 RFTN1Q14699 578 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 LBRQ14739 615 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 CYTH1Q15438 398 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 FNDC3BQ53EP0 1204 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 INO80DQ53TQ3 878 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 RETSATQ6NUM9 610 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 DRICH1Q6PGQ1 229 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 Q6ZVU0 165 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 BZW1Q7L1Q6 419 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 TEX26Q8N6G2 289 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 ALLCQ8N6M5 410 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 ZNF366Q8N895 744 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 IL17RCQ8NAC3 791 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 CCNYQ8ND76 341 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 RPLP0P6Q8NHW5 317 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 KIF18AQ8NI77 898 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 FAM174AQ8TBP5 190 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 UCMAQ8WVF2 138 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 CASKIN2Q8WXE0 1202 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 CLDN23Q96B33 292 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 RTP4Q96DX8 246 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 EXOC2Q96KP1 924 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 NAP1L3Q99457 506 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 IL12RB2Q99665 862 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 GABRG3Q99928 467 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 MGME1Q9BQP7 344 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 TMEM121Q9BTD3 319 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 CEP41Q9BYV8 373 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 OSBPL6Q9BZF3 934 aa7.15□□□□□ -1.26
CTDSPL2-210ENST00000560834 TM6SF2Q9BZW4 377 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms