RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CCDC6Q16204 474 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 DUOXA1Q1HG43 343 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 AASDHQ4L235 1098 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 INO80DQ53TQ3 878 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 CARD16Q5EG05 197 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 PEAR1Q5VY43 1037 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 POLNQ7Z5Q5 900 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 HDDC3Q8N4P3 179 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 TMIEQ8NEW7 156 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 PIP4K2CQ8TBX8 421 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 HMCESQ96FZ2 354 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 NEUROG2Q9H2A3 272 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 LRRC19Q9H756 370 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 RCOR3Q9P2K3 495 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 SUSD2Q9UGT4 822 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 IL36AQ9UHA7 158 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 FCF1Q9Y324 198 aaKnown RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 PIEZO1Q92508 2521 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 ANKRD36A6QL64 1941 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 ADAMTS9Q9P2N4 1935 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 LRRC72A6NJI9 287 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 CD160O95971 181 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 GSRP00390 522 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 DNA2P51530 1060 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 CDH6P55285 790 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 DPYSQ14117 519 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 MESDQ14696 234 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 PDK2Q15119 407 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 SWT1Q5T5J6 900 aaKnown RBP12.72□□□□□ -0.37
SLIRP-211ENST00000557623 DCAF12L1Q5VU92 463 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 TXNRD3NBQ6F5E7 133 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 TMCO3Q6UWJ1 677 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 AADATQ8N5Z0 425 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 FAM71BQ8TC56 605 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 PPP1R16AQ96I34 528 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 CELF6Q96J87 481 aaKnown RBP12.72□□□□□ -0.37
SLIRP-211ENST00000557623 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 HEPHQ9BQS7 1158 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 NUSAP1Q9BXS6 441 aaKnown RBP12.72□□□□□ -0.37
SLIRP-211ENST00000557623 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 TNKS2Q9H2K2 1166 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 DYRK4Q9NR20 520 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 SARDHQ9UL12 918 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 TPX2Q9ULW0 747 aaKnown RBP12.72□□□□□ -0.37
SLIRP-211ENST00000557623 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
SLIRP-211ENST00000557623 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.72□□□□□ -0.37
SLIRP-211ENST00000557623 RIF1Q5UIP0 2472 aaKnown RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 ATXN2Q99700 1313 aaKnown RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 TP53BP1Q12888 1972 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 KPNA3O00505 521 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 ZNF821O75541 412 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 NDUFA10O95299 355 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 AMPD1P23109 780 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SERPINB6P35237 376 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SLC1A1P43005 524 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 RAD51Q06609 339 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SF3A2Q15428 464 aaKnown RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 TRIM61Q5EBN2 209 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 AFMIDQ63HM1 303 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SLC23A3Q6PIS1 610 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 DPY19L3Q6ZPD9 716 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 RYBPQ8N488 228 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 KCTD6Q8NC69 237 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 OR2AP1Q8NGE2 309 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 OR14C36Q8NHC7 312 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 NETO1Q8TDF5 533 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 TSC1Q92574 1164 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 FAM131CQ96AQ9 280 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 CSPG4P5Q96PW8 444 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 KLC2Q9H0B6 622 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 C6orf106Q9H6K1 298 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SP110Q9HB58 689 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 UBA2Q9UBT2 640 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-211ENST00000557623 PLXNA2O75051 1894 aa12.71□□□□□ -0.37
SLIRP-211ENST00000557623 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 A0A0A6YYK5 440 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 A0A1B0GTW7 788 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 FAM47DPA6NHR8 397 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 SOWAHDA6NJG2 315 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 DFFAO00273 331 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms