RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SKAP2O75563 359 aaPredicted RBP4.46□□□□□ -1.7
VRK1-207ENST00000557352 MMP3P08254 477 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 CYP4B1P13584 511 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 RPS6KA3P51812 740 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 TUBA1BP68363 451 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 ZNF718Q3SXZ3 478 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 ATG16L2Q8NAA4 619 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 DUX5Q96PT3 197 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 TEFMQ96QE5 360 aaKnown RBP4.46□□□□□ -1.7
VRK1-207ENST00000557352 SLC25A33Q9BSK2 321 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 WDR12Q9GZL7 423 aaKnown RBP4.46□□□□□ -1.7
VRK1-207ENST00000557352 KCND3Q9UK17 655 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 LRCH1Q9Y2L9 728 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 LOC102724159A0A0B4J2E5 919 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 FAM90A20PA6NIJ5 464 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 ACP5P13686 325 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 DPP6P42658 865 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 TBX4P57082 545 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 MYBPC2Q14324 1141 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 SLC39A14Q15043 492 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 PWP2Q15269 919 aaKnown RBP4.45□□□□□ -1.7
VRK1-207ENST00000557352 PUM3Q15397 648 aaKnown RBP4.45□□□□□ -1.7
VRK1-207ENST00000557352 ZNF672Q499Z4 452 aaPredicted RBP4.45□□□□□ -1.7
VRK1-207ENST00000557352 TBC1D9BQ66K14 1250 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 SYNE3Q6ZMZ3 975 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 RRAGAQ7L523 313 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 BRSK2Q8IWQ3 736 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 SCAIQ8N9R8 606 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 TMEM18Q96B42 140 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 LHPPQ9H008 270 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 RETREG1Q9H6L5 497 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 TMLHEQ9NVH6 421 aa4.45□□□□□ -1.7
VRK1-207ENST00000557352 AGO1Q9UL18 857 aaKnown RBP4.45□□□□□ -1.7
VRK1-207ENST00000557352 TARSL2A2RTX5 802 aaKnown RBP4.44□□□□□ -1.7
VRK1-207ENST00000557352 C17orf100A8MU93 164 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 LINC01565O15544 149 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 SERPINI2O75830 405 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 GAS8-AS1O95177 125 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 PLGP00747 810 aaPredicted RBP4.44□□□□□ -1.7
VRK1-207ENST00000557352 SNRNP70P08621 437 aaKnown RBP4.44□□□□□ -1.7
VRK1-207ENST00000557352 ARSAP15289 507 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 POU3F1Q03052 451 aaPredicted RBP4.44□□□□□ -1.7
VRK1-207ENST00000557352 TNFAIP2Q03169 654 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 PDCLQ13371 301 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 WBP2NLQ6ICG8 309 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 SULT6B1Q6IMI4 303 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 CCSAPQ6IQ19 270 aaPredicted RBP4.44□□□□□ -1.7
VRK1-207ENST00000557352 RBFAQ8N0V3 343 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 TRAPPC9Q96Q05 1148 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 THAP1Q9NVV9 213 aa4.44□□□□□ -1.7
VRK1-207ENST00000557352 PRSS47A8MTI9 375 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 ACKR2O00590 384 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 SERPINB3P29508 390 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 C21orf33P30042 268 aaPredicted RBP4.43□□□□□ -1.7
VRK1-207ENST00000557352 SKIV2L2P42285 1042 aaKnown RBP4.43□□□□□ -1.7
VRK1-207ENST00000557352 DLX5P56178 289 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 POU5F1BQ06416 359 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 CTTNQ14247 550 aaKnown RBP4.43□□□□□ -1.7
VRK1-207ENST00000557352 EFHC1Q5JVL4 640 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 TMPRSS12Q86WS5 348 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 LILRB1Q8NHL6 650 aaPredicted RBP4.43□□□□□ -1.7
VRK1-207ENST00000557352 STT3BQ8TCJ2 826 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 IGSF21Q96ID5 467 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 RMDN3Q96TC7 470 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 DDX23Q9BUQ8 820 aaKnown RBP4.43□□□□□ -1.7
VRK1-207ENST00000557352 LRFN1Q9P244 771 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 CCDC88BA6NC98 1476 aa4.43□□□□□ -1.7
VRK1-207ENST00000557352 ERVV-2B6SEH9 535 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 KIF1CO43896 1103 aaKnown RBP4.42□□□□□ -1.7
VRK1-207ENST00000557352 TFRCP02786 760 aaKnown RBP4.42□□□□□ -1.7
VRK1-207ENST00000557352 IFIT2P09913 472 aaKnown RBP4.42□□□□□ -1.7
VRK1-207ENST00000557352 SETSIPP0DME0 302 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 CKMT1AP12532 417 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 MXI1P50539 228 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 KRTAP24-1Q3LI83 254 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 MAP9Q49MG5 647 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 RASGRP2Q7LDG7 609 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 PATL1Q86TB9 770 aaKnown RBP4.42□□□□□ -1.7
VRK1-207ENST00000557352 TMC8Q8IU68 726 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 FSIP1Q8NA03 581 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 GPT2Q8TD30 523 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 OTUD7AQ8TE49 926 aaPredicted RBP4.42□□□□□ -1.7
VRK1-207ENST00000557352 TXNDC15Q96J42 360 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 HERC2P3Q9BVR0 1158 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 PCGF6Q9BYE7 350 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 NPFFR1Q9GZQ6 430 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 PLEKHA2Q9HB19 425 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 DACT1Q9NYF0 836 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 GRHL1Q9NZI5 618 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 DHDHQ9UQ10 334 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 SLC45A1Q9Y2W3 748 aa4.42□□□□□ -1.7
VRK1-207ENST00000557352 A0A1B0GVM2 712 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 KDM4EB2RXH2 506 aaPredicted RBP4.41□□□□□ -1.7
VRK1-207ENST00000557352 H0Y3Z8 333 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 STRNO43815 780 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 KRT36O76013 467 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 DAOP14920 347 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 YWHAQP27348 245 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 MVDP53602 400 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms