RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CEP68Q76N32 757 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 FAM124AQ86V42 546 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 UBL4BQ8N7F7 174 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 OR2AP1Q8NGE2 309 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 CASKIN2Q8WXE0 1202 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 ISG20Q96AZ6 181 aaKnown RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 SPACA7Q96KW9 195 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 ALS2CR12Q96Q35 445 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 HERPUD2Q9BSE4 406 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 CINPQ9BW66 212 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 HEMGNQ9BXL5 484 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 PABPC3Q9H361 631 aaKnown RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 ZDHHC6Q9H6R6 413 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 TRMT1Q9NXH9 659 aaKnown RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 USP36Q9P275 1121 aaKnown RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 HECAQ9UBI9 543 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 SERGEFQ9UGK8 458 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 MBD1Q9UIS9 605 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 PYCARDQ9ULZ3 195 aa17.78■□□□□ 0.44
SHMT2-225ENST00000556798 FARP1Q9Y4F1 1045 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-225ENST00000556798 A0A1W2PP55 124 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 MIF4GDA9UHW6 222 aaKnown RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 PLK4O00444 970 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 ALOX15BO15296 676 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 ZNF217O75362 1048 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 PEX11BO96011 259 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 GSRP00390 522 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 PYGMP11217 842 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 PECAM1P16284 738 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 ZFXP17010 805 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 SLC8A1P32418 973 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 CNR2P34972 360 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 RGRP47804 291 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 SNRPD1P62314 119 aaKnown RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 SLC10A7Q0GE19 358 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 TFDP2Q14188 446 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 TTC31Q49AM3 519 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 TMCO4Q5TGY1 634 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 DCAF12L1Q5VU92 463 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 DSG4Q86SJ6 1040 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 METTL3Q86U44 580 aaKnown RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 KBTBD6Q86V97 674 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 REXO1L1PQ8IX06 675 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 AADATQ8N5Z0 425 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 PIP4K2CQ8TBX8 421 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 GANCQ8TET4 914 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 HAUS1Q96CS2 278 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 HES6Q96HZ4 224 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 GDAP1L1Q96MZ0 367 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 ITM2CQ9NQX7 267 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 SAE1Q9UBE0 346 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-225ENST00000556798 IL36AQ9UHA7 158 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 PPM1HQ9ULR3 514 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 WASF2Q9Y6W5 498 aa17.77■□□□□ 0.44
SHMT2-225ENST00000556798 DOCK9Q9BZ29 2069 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 C1QTNF3-AMACRE9PGA6 284 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 INSIG1O15503 277 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 LEFTY1O75610 366 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 IGSF6O95976 241 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 ADH1BP00325 375 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 C7P10643 843 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 MX2P20592 715 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 ZBTB16Q05516 673 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 LBRQ14739 615 aaKnown RBP17.76■□□□□ 0.43
SHMT2-225ENST00000556798 ARSIQ5FYB1 569 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 B4GALNT4Q76KP1 1039 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 DEFB119Q8N690 84 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 TSEN2Q8NCE0 465 aaKnown RBP17.76■□□□□ 0.43
SHMT2-225ENST00000556798 ZNF419Q96HQ0 510 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-225ENST00000556798 ZNF599Q96NL3 588 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 LGMNQ99538 433 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 HEPHQ9BQS7 1158 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 OSBPL8Q9BZF1 889 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 EPC1Q9H2F5 836 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 FBXL12Q9NXK8 326 aa17.76■□□□□ 0.43
SHMT2-225ENST00000556798 EVLQ9UI08 416 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-225ENST00000556798 ARIH1Q9Y4X5 557 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-225ENST00000556798 USP27XA6NNY8 438 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 KPNA3O00505 521 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-225ENST00000556798 KRIT1O00522 736 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 MUSKO15146 869 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 ZSCAN12O43309 604 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 GJB3O75712 270 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 RNASEH2AO75792 299 aaKnown RBP17.75■□□□□ 0.43
SHMT2-225ENST00000556798 PRNPP04156 253 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 C5AR1P21730 350 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 TGM2P21980 687 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 COPS2P61201 443 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 BYSLQ13895 437 aaKnown RBP17.75■□□□□ 0.43
SHMT2-225ENST00000556798 ZNF235Q14590 738 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 RFTN1Q14699 578 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-225ENST00000556798 FAM182AQ5T1J6 154 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 MEI1Q5TIA1 1274 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 HDDC3Q8N4P3 179 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 CCNYQ8ND76 341 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 TRIM58Q8NG06 486 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 NSMCE1Q8WV22 266 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 ARRDC3Q96B67 414 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 HDAC11Q96DB2 347 aa17.75■□□□□ 0.43
SHMT2-225ENST00000556798 TOE1Q96GM8 510 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms