RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 UGGT1Q9NYU2 1555 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 MED14O60244 1454 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 TNRQ92752 1358 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 DUOX2Q9NRD8 1548 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 I6L893 689 aaPredicted RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 VWA5AO00534 786 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 LIASO43766 372 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 SKAP2O75563 359 aaPredicted RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 PRSS2P07478 247 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 IFIT2P09913 472 aaKnown RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 GSTM2P28161 218 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 ALKBH1Q13686 389 aaKnown RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 SHBQ15464 509 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 PFKFB4Q16877 469 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 FSCBQ5H9T9 825 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 PRAMEF19Q5SWL8 479 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 MTFR2Q6P444 385 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 Q6ZSV7 163 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 SLC44A2Q8IWA5 706 aaPredicted RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 ZNF333Q96JL9 665 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 PIGSQ96S52 555 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 CDT1Q9H211 546 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 KLHL31Q9H511 634 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 C6orf106Q9H6K1 298 aaPredicted RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 ELAC1Q9H777 363 aaKnown RBP5.45□□□□□ -1.54
PRPF39-209ENST00000556353 Q9N2J8 555 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 ABCC5O15440 1437 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 NLRP1Q9C000 1473 aa5.45□□□□□ -1.54
PRPF39-209ENST00000556353 CPS1P31327 1500 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 EFCAB6Q5THR3 1501 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 A0A087WV62 115 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 TMEM247A6NEH6 219 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 TMCC1O94876 653 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 GLUD1P00367 558 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 UNGP13051 313 aaPredicted RBP5.44□□□□□ -1.54
PRPF39-209ENST00000556353 TYK2P29597 1187 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 AVPR1AP37288 418 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 GLUD2P49448 558 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 PMS2P54278 862 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 RRP1P56182 461 aaKnown RBP5.44□□□□□ -1.54
PRPF39-209ENST00000556353 KRTAP10-6P60371 365 aaPredicted RBP5.44□□□□□ -1.54
PRPF39-209ENST00000556353 AP2B1P63010 937 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 MED1Q15648 1581 aaPredicted RBP5.44□□□□□ -1.54
PRPF39-209ENST00000556353 GALNTL6Q49A17 601 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 TMEM71Q6P5X7 295 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 KLHL17Q6TDP4 642 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 FAM83HQ6ZRV2 1179 aaPredicted RBP5.44□□□□□ -1.54
PRPF39-209ENST00000556353 ZNF367Q7RTV3 350 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 VPS52Q8N1B4 723 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 HORMAD2Q8N7B1 307 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 KCNJ9Q92806 393 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 LMLNQ96KR4 655 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 MIA2Q96PC5 1412 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 SEPSECSQ9HD40 501 aaKnown RBP5.44□□□□□ -1.54
PRPF39-209ENST00000556353 CHST12Q9NRB3 414 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 EP400Q96L91 3159 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 ARHGAP23Q9P227 1491 aa5.44□□□□□ -1.54
PRPF39-209ENST00000556353 E9PCH4 1651 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 SLIT1O75093 1534 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.43□□□□□ -1.54
PRPF39-209ENST00000556353 UNC13BO14795 1591 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 DAPK1P53355 1430 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 FGD6Q6ZV73 1430 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.43□□□□□ -1.54
PRPF39-209ENST00000556353 CLEC18AA5D8T8 446 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 SYT5O00445 386 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 HNRNPRO43390 633 aaKnown RBP5.43□□□□□ -1.54
PRPF39-209ENST00000556353 MYZAPP0CAP1 466 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 SERPINA4P29622 427 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 TNFAIP2Q03169 654 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 IZUMO4Q1ZYL8 232 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 TTC22Q5TAA0 569 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 HEPHL1Q6MZM0 1159 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 Q6ZTC4 211 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 RNF144BQ7Z419 303 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 CCDC117Q8IWD4 279 aaPredicted RBP5.43□□□□□ -1.54
PRPF39-209ENST00000556353 CLEC18CQ8NCF0 446 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 ADAMTS14Q8WXS8 1223 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 ARRDC3Q96B67 414 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 C3orf49Q96BT1 292 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 APOLD1Q96LR9 279 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 PRDM8Q9NQV8 689 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 SLC22A11Q9NSA0 550 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 NDUFAF4Q9P032 175 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 TET3O43151 1660 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 LMTK2Q8IWU2 1503 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 LRRC7Q96NW7 1537 aa5.43□□□□□ -1.54
PRPF39-209ENST00000556353 ERBINQ96RT1 1412 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 CHD2O14647 1828 aaKnown RBP5.42□□□□□ -1.54
PRPF39-209ENST00000556353 NPIPB13A6NJU9 1138 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 NPIPB5A8MRT5 1133 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 NPIPB4C9JG80 1138 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PLIN1O60240 522 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 CCNT1O60563 726 aaKnown RBP5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PRKCHP24723 683 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PDIA3P30101 505 aaKnown RBP5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PPP3CCP48454 512 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 ART1P52961 327 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 GAS1P54826 345 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms