RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 FAM189A1O60320 539 aa15.06■□□□□ 0
CUX1-215ENST00000556210 CLPTM1O96005 669 aa15.06■□□□□ 0
CUX1-215ENST00000556210 MRPS6P82932 125 aaKnown RBP15.06■□□□□ 0
CUX1-215ENST00000556210 INCA1Q0VD86 236 aa15.06■□□□□ 0
CUX1-215ENST00000556210 TAF2Q6P1X5 1199 aa15.06■□□□□ 0
CUX1-215ENST00000556210 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
CUX1-215ENST00000556210 WDR83Q9BRX9 315 aaKnown RBP15.06■□□□□ 0
CUX1-215ENST00000556210 FAM96AQ9H5X1 160 aa15.06■□□□□ 0
CUX1-215ENST00000556210 NCKIPSDQ9NZQ3 722 aa15.06■□□□□ 0
CUX1-215ENST00000556210 THEGQ9P2T0 379 aa15.06■□□□□ 0
CUX1-215ENST00000556210 GEMP55040 296 aa15.05■□□□□ 0
CUX1-215ENST00000556210 TBX4P57082 545 aa15.05■□□□□ 0
CUX1-215ENST00000556210 DAOAP59103 153 aa15.05■□□□□ 0
CUX1-215ENST00000556210 GSTA3Q16772 222 aa15.05■□□□□ 0
CUX1-215ENST00000556210 ZNF792Q3KQV3 632 aa15.05■□□□□ 0
CUX1-215ENST00000556210 FRA10AC1Q70Z53 315 aa15.05■□□□□ 0
CUX1-215ENST00000556210 ERLEC1Q96DZ1 483 aa15.05■□□□□ 0
CUX1-215ENST00000556210 UPF3AQ9H1J1 476 aaKnown RBP15.05■□□□□ 0
CUX1-215ENST00000556210 SLC2A6Q9UGQ3 507 aa15.05■□□□□ 0
CUX1-215ENST00000556210 F8W810 466 aa15.05■□□□□ -0
CUX1-215ENST00000556210 DAB1O75553 588 aa15.05■□□□□ -0
CUX1-215ENST00000556210 SORBS2O94875 1100 aaKnown RBP15.05■□□□□ -0
CUX1-215ENST00000556210 RTN3O95197 1032 aaPredicted RBP15.05■□□□□ -0
CUX1-215ENST00000556210 PTK2BQ14289 1009 aa15.05■□□□□ -0
CUX1-215ENST00000556210 GALNT3Q14435 633 aa15.05■□□□□ -0
CUX1-215ENST00000556210 PPM1LQ5SGD2 360 aa15.05■□□□□ -0
CUX1-215ENST00000556210 BNC2Q6ZN30 1099 aaPredicted RBP15.05■□□□□ -0
CUX1-215ENST00000556210 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ -0
CUX1-215ENST00000556210 HDAC10Q969S8 669 aa15.05■□□□□ -0
CUX1-215ENST00000556210 ESAMQ96AP7 390 aa15.05■□□□□ -0
CUX1-215ENST00000556210 GLT1D1Q96MS3 346 aa15.05■□□□□ -0
CUX1-215ENST00000556210 NR1H4Q96RI1 486 aaPredicted RBP15.05■□□□□ -0
CUX1-215ENST00000556210 APOL5Q9BWW9 433 aa15.05■□□□□ -0
CUX1-215ENST00000556210 BPIFA1Q9NP55 256 aa15.05■□□□□ -0
CUX1-215ENST00000556210 SLC7A8Q9UHI5 535 aa15.05■□□□□ -0
CUX1-215ENST00000556210 TRPV2Q9Y5S1 764 aa15.05■□□□□ -0
CUX1-215ENST00000556210 ARHGAP10A1A4S6 786 aa15.05■□□□□ -0
CUX1-215ENST00000556210 NR5A2O00482 541 aa15.05■□□□□ -0
CUX1-215ENST00000556210 THRAP10827 490 aa15.05■□□□□ -0
CUX1-215ENST00000556210 HADHAP40939 763 aa15.05■□□□□ -0
CUX1-215ENST00000556210 ZBTB17Q13105 803 aa15.05■□□□□ -0
CUX1-215ENST00000556210 TBCCQ15814 346 aa15.05■□□□□ -0
CUX1-215ENST00000556210 SLC9A4Q6AI14 798 aa15.05■□□□□ -0
CUX1-215ENST00000556210 KYQ8NBH2 561 aa15.05■□□□□ -0
CUX1-215ENST00000556210 EZH1Q92800 747 aaPredicted RBP15.05■□□□□ -0
CUX1-215ENST00000556210 TUBGCP5Q96RT8 1024 aa15.05■□□□□ -0
CUX1-215ENST00000556210 HBEGFQ99075 208 aa15.05■□□□□ -0
CUX1-215ENST00000556210 IL22Q9GZX6 179 aa15.05■□□□□ -0
CUX1-215ENST00000556210 MMADHCQ9H3L0 296 aaPredicted RBP15.05■□□□□ -0
CUX1-215ENST00000556210 CRTAC1Q9NQ79 661 aa15.05■□□□□ -0
CUX1-215ENST00000556210 FBXO5Q9UKT4 447 aa15.05■□□□□ -0
CUX1-215ENST00000556210 COL2A1P02458 1487 aaPredicted RBP15.04■□□□□ -0
CUX1-215ENST00000556210 A0A1W2PQH9 124 aa15.04■□□□□ -0
CUX1-215ENST00000556210 ALDOAP04075 364 aaKnown RBP15.04■□□□□ -0
CUX1-215ENST00000556210 COX4I1P13073 169 aa15.04■□□□□ -0
CUX1-215ENST00000556210 DEFB128Q7Z7B8 93 aa15.04■□□□□ -0
CUX1-215ENST00000556210 RAET1EQ8TD07 263 aa15.04■□□□□ -0
CUX1-215ENST00000556210 HNRNPABQ99729 332 aaKnown RBP15.04■□□□□ -0
CUX1-215ENST00000556210 CAAP1Q9H8G2 361 aa15.04■□□□□ -0
CUX1-215ENST00000556210 STX16-NPEPL1H3BU86 382 aa15.04■□□□□ -0
CUX1-215ENST00000556210 FLT3LGP49771 235 aa15.04■□□□□ -0
CUX1-215ENST00000556210 WNT3AP56704 352 aa15.04■□□□□ -0
CUX1-215ENST00000556210 SLC9B1Q4ZJI4 515 aa15.04■□□□□ -0
CUX1-215ENST00000556210 LIN52Q52LA3 116 aa15.04■□□□□ -0
CUX1-215ENST00000556210 DHDDSQ86SQ9 333 aa15.04■□□□□ -0
CUX1-215ENST00000556210 SMOQ99835 787 aa15.04■□□□□ -0
CUX1-215ENST00000556210 MTG1Q9BT17 334 aaPredicted RBP15.04■□□□□ -0
CUX1-215ENST00000556210 TRMT13Q9NUP7 481 aaKnown RBP15.04■□□□□ -0
CUX1-215ENST00000556210 ZNF711Q9Y462 761 aa15.04■□□□□ -0
CUX1-215ENST00000556210 ANGPT2O15123 496 aa15.04■□□□□ -0
CUX1-215ENST00000556210 TM7SF2O76062 418 aa15.04■□□□□ -0
CUX1-215ENST00000556210 BAIAP3O94812 1187 aa15.04■□□□□ -0
CUX1-215ENST00000556210 SERPINA6P08185 405 aa15.04■□□□□ -0
CUX1-215ENST00000556210 TPSB2P20231 275 aa15.04■□□□□ -0
CUX1-215ENST00000556210 RPL14P50914 215 aaKnown RBP15.04■□□□□ -0
CUX1-215ENST00000556210 PTPRCAPQ14761 206 aa15.04■□□□□ -0
CUX1-215ENST00000556210 TPSAB1Q15661 275 aa15.04■□□□□ -0
CUX1-215ENST00000556210 PFKFB4Q16877 469 aa15.04■□□□□ -0
CUX1-215ENST00000556210 FCRL3Q96P31 734 aaPredicted RBP15.04■□□□□ -0
CUX1-215ENST00000556210 OR52B2Q96RD2 323 aa15.04■□□□□ -0
CUX1-215ENST00000556210 EFCAB1Q9HAE3 211 aa15.04■□□□□ -0
CUX1-215ENST00000556210 NCAM2O15394 837 aa15.03■□□□□ -0
CUX1-215ENST00000556210 NOL3O60936 208 aaKnown RBP15.03■□□□□ -0
CUX1-215ENST00000556210 ENPEPQ07075 957 aa15.03■□□□□ -0
CUX1-215ENST00000556210 SEMA5AQ13591 1074 aa15.03■□□□□ -0
CUX1-215ENST00000556210 KRT72Q14CN4 511 aa15.03■□□□□ -0
CUX1-215ENST00000556210 FAM110CQ1W6H9 321 aa15.03■□□□□ -0
CUX1-215ENST00000556210 AGAP9Q5VTM2 703 aa15.03■□□□□ -0
CUX1-215ENST00000556210 CLEC6AQ6EIG7 209 aa15.03■□□□□ -0
CUX1-215ENST00000556210 KBTBD7Q8WVZ9 684 aa15.03■□□□□ -0
CUX1-215ENST00000556210 CNGB3Q9NQW8 809 aa15.03■□□□□ -0
CUX1-215ENST00000556210 MIOSQ9NXC5 875 aa15.03■□□□□ -0
CUX1-215ENST00000556210 DLEC1Q9Y238 1755 aa15.03■□□□□ -0
CUX1-215ENST00000556210 GNGT2O14610 69 aa15.03■□□□□ -0
CUX1-215ENST00000556210 RAMP2O60895 175 aa15.03■□□□□ -0
CUX1-215ENST00000556210 AXLP30530 894 aa15.03■□□□□ -0
CUX1-215ENST00000556210 SLC5A3P53794 718 aa15.03■□□□□ -0
CUX1-215ENST00000556210 CCDC153Q494R4 210 aa15.03■□□□□ -0
CUX1-215ENST00000556210 PITRM1Q5JRX3 1037 aa15.03■□□□□ -0
CUX1-215ENST00000556210 EGFL6Q8IUX8 553 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms