RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ACTN2P35609 894 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 DEKP35659 375 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 IFI35P80217 286 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 LMNB2Q03252 620 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ZBTB16Q05516 673 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ADCY2Q08462 1091 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ITKQ08881 620 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 NSUN2Q08J23 767 aaKnown RBP eCLIP7.76□□□□□ -1.17
TDP1-214ENST00000556063 KLF1Q13351 362 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 TUBB2AQ13885 445 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 BYSLQ13895 437 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 PRKD1Q15139 912 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 CYTH1Q15438 398 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 CCNG2Q16589 344 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 TTC31Q49AM3 519 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 ZNF776Q68DI1 518 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 LEKR1Q6ZMV7 388 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ARHGAP36Q6ZRI8 547 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 Q6ZVU0 165 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ADAT2Q7Z6V5 191 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 TP53INP2Q8IXH6 220 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PGBD3Q8N328 593 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PAF1Q8N7H5 531 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 NETO2Q8NC67 525 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 OR2AP1Q8NGE2 309 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 OR2T3Q8NH03 318 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 KIF18AQ8NI77 898 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 FRS2Q8WU20 508 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 HTR3CQ8WXA8 447 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 MAML1Q92585 1016 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PRCCQ92733 491 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 PTPRN2Q92932 1015 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 NKD2Q969F2 451 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 MYO19Q96H55 970 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 QKIQ96PU8 341 aaKnown RBP eCLIP7.76□□□□□ -1.17
TDP1-214ENST00000556063 LGMNQ99538 433 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PRRX2Q99811 253 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 HEPHQ9BQS7 1158 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 HERPUD2Q9BSE4 406 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 TUBB2BQ9BVA1 445 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 TM6SF2Q9BZW4 377 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 POLR1EQ9GZS1 481 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 ZDHHC4Q9NPG8 344 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PRSS16Q9NQE7 514 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 SEPT10Q9P0V9 454 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 DLGAP2Q9P1A6 1054 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 BCCIPQ9P287 314 aaKnown RBP eCLIP7.76□□□□□ -1.17
TDP1-214ENST00000556063 SAE1Q9UBE0 346 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 HECAQ9UBI9 543 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 FEZ2Q9UHY8 353 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 TRHDEQ9UKU6 1024 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 SCML1Q9UN30 329 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ZNF148Q9UQR1 794 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 NYNRINQ9P2P1 1898 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 CACNA1HO95180 2353 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 TCRBV21S2A2A0A5A6 115 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 BCLAF3A2AJT9 711 aaKnown RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 WASH3PC4AMC7 463 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 KCNK1O00180 336 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 KRIT1O00522 736 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 KCNN4O15554 427 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CD160O95971 181 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 IL1BP01584 269 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 JCHAINP01591 159 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 DNTTP04053 509 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CHRM1P11229 460 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 ACADMP11310 421 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 C5AR1P21730 350 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CHRNA3P32297 505 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TNNT3P45378 269 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 CSNK1DP48730 415 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CCNHP51946 323 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 NRLP54845 237 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 AP1S1P61966 158 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 SATB1Q01826 763 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CKAP4Q07065 602 aaKnown RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 SLC10A7Q0GE19 358 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 GAS6Q14393 721 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 MYLK3Q32MK0 819 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TEX44Q53QW1 395 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 CFAP58Q5T655 872 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 C9orf64Q5T6V5 341 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 ITPRIPL1Q6GPH6 555 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 PKN3Q6P5Z2 889 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 DRICH1Q6PGQ1 229 aaPredicted RBP7.75□□□□□ -1.17
TDP1-214ENST00000556063 DPY19L3Q6ZPD9 716 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 PID1Q7Z2X4 250 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TMPRSS6Q8IU80 811 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 C1orf210Q8IVY1 113 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 STK40Q8N2I9 435 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TEX26Q8N6G2 289 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 ZNF366Q8N895 744 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TMEM105Q8N8V8 129 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 TMIEQ8NEW7 156 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 OR2A12Q8NGT7 310 aa7.75□□□□□ -1.17
TDP1-214ENST00000556063 SLC35B2Q8TB61 432 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms