RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 SLCO3A1Q9UIG8 710 aa12.72□□□□□ -0.37
ABCD4-223ENST00000555904 DRG1Q9Y295 367 aaKnown RBP12.72□□□□□ -0.37
ABCD4-223ENST00000555904 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 SMAD6O43541 496 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 OPHN1O60890 802 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 RNASEH1O60930 286 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 PEX11BO96011 259 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 GSRP00390 522 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 HOXB2P14652 356 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 CES1P23141 567 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 PRKCHP24723 683 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 PTPN3P26045 913 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 MAGEA9P43362 315 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 DR1Q01658 176 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 ZBTB17Q13105 803 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 ELAVL3Q14576 367 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 PPP1R7Q15435 360 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 P3H1Q32P28 736 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 TEX44Q53QW1 395 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 PID1Q7Z2X4 250 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 ZNF572Q7Z3I7 529 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 TEX26Q8N6G2 289 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 PAF1Q8N7H5 531 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 IL17RCQ8NAC3 791 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 TXNDC5Q8NBS9 432 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 TSEN2Q8NCE0 465 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 OR2AP1Q8NGE2 309 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 LRRC45Q96CN5 670 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 EXOC2Q96KP1 924 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 SPATA13Q96N96 652 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 IL12RB2Q99665 862 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 IER2Q9BTL4 223 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 DDX47Q9H0S4 455 aaKnown RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 TMEM245Q9H330 911 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 C10orf88Q9H8K7 445 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 ZDHHC4Q9NPG8 344 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 RSPH14Q9UHP6 348 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 MTF2Q9Y483 593 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-223ENST00000555904 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
ABCD4-223ENST00000555904 GOLGA6CA6NDK9 693 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 GOLGA6BA6NDN3 693 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 TMEM221A6NGB7 291 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 M0R296 226 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 GCATO75600 419 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 HLA-DQB2P05538 268 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 GOLGA6DP0CG33 693 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 HLA-EP13747 358 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 CA4P22748 312 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 WASP42768 502 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 RPS9P46781 194 aaKnown RBP12.7□□□□□ -0.38
ABCD4-223ENST00000555904 KCNJ1P48048 391 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 SCNN1BP51168 640 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 AP1S1P61966 158 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 C2orf54Q08AI8 447 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
ABCD4-223ENST00000555904 WASHC5Q12768 1159 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ENPP2Q13822 863 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
ABCD4-223ENST00000555904 PRPSAP1Q14558 356 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 GRM3Q14832 879 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 CYTH1Q15438 398 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 CARD16Q5EG05 197 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 RALGPS1Q5JS13 557 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ANKRD20A2Q5SQ80 823 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 CFAP58Q5T655 872 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ANKRD20A1Q5TYW2 823 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ANKRD20A3Q5VUR7 823 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-223ENST00000555904 MAATS1Q7Z4T9 603 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ZNF567Q8N184 647 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 CCDC110Q8TBZ0 833 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 FRS2Q8WU20 508 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 OR8D1Q8WZ84 308 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 MYO19Q96H55 970 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 TEKT5Q96M29 485 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 ACOX2Q99424 681 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 KRT12Q99456 494 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 GABRG3Q99928 467 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 MGME1Q9BQP7 344 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 FBRSQ9HAH7 460 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 GOLGA6AQ9NYA3 693 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 PAK5Q9P286 719 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 MMP17Q9ULZ9 603 aa12.7□□□□□ -0.38
ABCD4-223ENST00000555904 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
ABCD4-223ENST00000555904 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-223ENST00000555904 CHURC1-FNTBB4DL54 471 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms