RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TRMT61BQ9BVS5 477 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 HPS4Q9NQG7 708 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 RRN3Q9NYV6 651 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 AGO1Q9UL18 857 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 TEX264Q9Y6I9 313 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 IKBKGQ9Y6K9 419 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 KCNU1A8MYU2 1149 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 SPAG7O75391 227 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 ALADP13716 330 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 CCNB1P14635 433 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 NQO1P15559 274 aaKnown RBP17.71■□□□□ 0.43
SHOX-204ENST00000554971 DENND1CQ8IV53 801 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 CDKL3Q8IVW4 592 aaPredicted RBP17.71■□□□□ 0.43
SHOX-204ENST00000554971 FITM2Q8N6M3 262 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 MZB1Q8WU39 189 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 KLC2Q9H0B6 622 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 ECT2Q9H8V3 914 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 ARHGEF3Q9NR81 526 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 TMPRSS4Q9NRS4 437 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 TXLNGQ9NUQ3 528 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 GTSE1Q9NYZ3 720 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 SORCS3Q9UPU3 1222 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 SH3BP1Q9Y3L3 701 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 WDR87Q6ZQQ6 2873 aa17.71■□□□□ 0.43
SHOX-204ENST00000554971 ZNF189O75820 626 aaPredicted RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 ARSAP15289 507 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 IL4RP24394 825 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 CXCR3P49682 368 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 GTF2A1P52655 376 aaPredicted RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 ZKSCAN8Q15776 578 aaPredicted RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 HP1BP3Q5SSJ5 553 aaPredicted RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 LGSNQ5TDP6 509 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 ADGRG2Q8IZP9 1017 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 BANPQ8N9N5 519 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 FAM172AQ8WUF8 416 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 SLC44A1Q8WWI5 657 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 CHFRQ96EP1 664 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 EBF3Q9H4W6 596 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 PCDH18Q9HCL0 1135 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 DUSP12Q9UNI6 340 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 MYO18AQ92614 2054 aaKnown RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 ATG2BQ96BY7 2078 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 MT-ND3P03897 115 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 KPNA1P52294 538 aaPredicted RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 NADSYN1Q6IA69 706 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 ASRGL1Q7L266 308 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 FAM131BQ86XD5 332 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 PSTKQ8IV42 348 aaKnown RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 C4orf33Q8N1A6 199 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 KIAA1958Q8N8K9 716 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 KLHL29Q96CT2 875 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 DUS2Q9NX74 493 aaKnown RBP17.7■□□□□ 0.42
SHOX-204ENST00000554971 ZNF180Q9UJW8 692 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 STOML2Q9UJZ1 356 aa17.7■□□□□ 0.42
SHOX-204ENST00000554971 A0A1W2PPM1 405 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 TCRBV7S3A2A0A539 114 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 ELK3P41970 407 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 DEUP1Q05D60 604 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 MMRN1Q13201 1228 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 SLC1A5Q15758 541 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 DPYSL2Q16555 572 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 FYB2Q5VWT5 728 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 BZW1Q7L1Q6 419 aaKnown RBP17.69■□□□□ 0.42
SHOX-204ENST00000554971 STRADAQ7RTN6 431 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 PQLC3Q8N755 202 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 ZNF75CPQ92670 426 aaPredicted RBP17.69■□□□□ 0.42
SHOX-204ENST00000554971 WDR83Q9BRX9 315 aaKnown RBP17.69■□□□□ 0.42
SHOX-204ENST00000554971 BRD9Q9H8M2 597 aa17.69■□□□□ 0.42
SHOX-204ENST00000554971 GFRA2O00451 464 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 HNRNPCL1O60812 293 aaKnown RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 UNC5CO95185 931 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 MOCS2O96007 188 aaPredicted RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 IL1BP01584 269 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 SRFP11831 508 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 CCR1P32246 355 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 HARS2P49590 506 aaKnown RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 SLC18A2Q05940 514 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 DNAJC3Q13217 504 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 PPP2R5DQ14738 602 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 ARTNQ5T4W7 220 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 LVRNQ6Q4G3 990 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 CAPN12Q6ZSI9 719 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 CYS1Q717R9 158 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 ZC3H18Q86VM9 953 aaKnown RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 CHSY1Q86X52 802 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 FAM217AQ8IXS0 508 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 MYEOVQ96EZ4 313 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 RAB3IPQ96QF0 476 aaPredicted RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 MAGEB5Q9BZ81 275 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 C10orf88Q9H8K7 445 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 SLC2A4RGQ9NR83 387 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 ARHGEF38Q9NXL2 777 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 RCOR3Q9P2K3 495 aaPredicted RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 LSM7Q9UK45 103 aaKnown RBP17.68■□□□□ 0.42
SHOX-204ENST00000554971 KIAA1549LQ6ZVL6 1849 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 GCATO75600 419 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 ATP6V1G2O95670 118 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 INHBAP08476 426 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 SLC6A4P31645 630 aa17.68■□□□□ 0.42
SHOX-204ENST00000554971 RASSF2P50749 326 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms