RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 LRRC23Q53EV4 343 aaPredicted RBP12.03□□□□□ -0.48
XRCC3-208ENST00000554811 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 C4orf22Q6V702 233 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 BHMTQ93088 406 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 CIB1Q99828 191 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 ALG9Q9H6U8 611 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 GPAMQ9HCL2 828 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 RNF103-CHMP3A0A140T963 221 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 ZNF839A8K0R7 811 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 MMP3P08254 477 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 CCDC166P0CW27 439 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 CPOXP36551 454 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 PPP1R3AQ16821 1122 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 STRADAQ7RTN6 431 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 ZDHHC17Q8IUH5 632 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 NAT14Q8WUY8 206 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 COLEC11Q9BWP8 271 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 AP5M1Q9H0R1 490 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.48
XRCC3-208ENST00000554811 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.48
XRCC3-208ENST00000554811 EFCAB1Q9HAE3 211 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.48
XRCC3-208ENST00000554811 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.48
XRCC3-208ENST00000554811 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.48
XRCC3-208ENST00000554811 A0A0G2JLL6 359 aaPredicted RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 ERI2A8K979 691 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 DPYSL4O14531 572 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 AP2A1O95782 977 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 AHSGP02765 367 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 TAS2R39P59534 338 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 STX1BP61266 288 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 PTPRCAPQ14761 206 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 SNX17Q15036 470 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 PRRT2Q7Z6L0 340 aaPredicted RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 UNC93AQ86WB7 457 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 PPTC7Q8NI37 304 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 HSFY1Q96LI6 401 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 DCUN1D5Q9BTE7 237 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 GMPR2Q9P2T1 348 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 LZTS1Q9Y250 596 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 HACD1B0YJ81 288 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 SUPT3HO75486 399 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 C1QAP02745 245 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 ME2P23368 584 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 RPL10P27635 214 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 CHN2P52757 468 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 NIPAL4Q0D2K0 466 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 KYAT1Q16773 422 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 SLC5A9Q2M3M2 681 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 MTX3Q5HYI7 312 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 RBM20Q5T481 1227 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 CXorf38Q8TB03 319 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 RPL10LQ96L21 214 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 OLFM3Q96PB7 478 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 CCT7Q99832 543 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 SPON2Q9BUD6 331 aa12.02□□□□□ -0.49
XRCC3-208ENST00000554811 FBRSL1Q9HCM7 1045 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 ADARB2Q9NS39 739 aaKnown RBP12.02□□□□□ -0.49
XRCC3-208ENST00000554811 RGSL1A5PLK6 1076 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 FESP07332 822 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 GFAPP14136 432 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 DARSP14868 501 aaKnown RBP12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CES1P23141 567 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CDK7P50613 346 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 ITGA7Q13683 1181 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 MFSD4BQ5TF39 518 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CNSTQ6PJW8 725 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 RNF111Q6ZNA4 994 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 MLPHQ9BV36 600 aaPredicted RBP12.01□□□□□ -0.49
XRCC3-208ENST00000554811 FAM96AQ9H5X1 160 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 GNEQ9Y223 722 aaKnown RBP12.01□□□□□ -0.49
XRCC3-208ENST00000554811 BTRCQ9Y297 605 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 TAPT1Q6NXT6 567 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 TLK2Q86UE8 772 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 TAC4Q86UU9 113 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 MIPOL1Q8TD10 442 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 GATA6Q92908 595 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 HBEGFQ99075 208 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 PPME1Q9Y570 386 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 TIPRLO75663 272 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 YWHAQP27348 245 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CCR1P32246 355 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CA8P35219 290 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 MS4A2Q01362 244 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 FASTKQ14296 549 aaKnown RBP12.01□□□□□ -0.49
XRCC3-208ENST00000554811 TLR1Q15399 786 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 LIPMQ5VYY2 423 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 KLC3Q6P597 504 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CIR1Q86X95 450 aaPredicted RBP12.01□□□□□ -0.49
XRCC3-208ENST00000554811 PDSS2Q86YH6 399 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CEP97Q8IW35 865 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 GALNT15Q8N3T1 639 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 LRRC52Q8N7C0 313 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 SLC16A10Q8TF71 515 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 CYGBQ8WWM9 190 aa12.01□□□□□ -0.49
XRCC3-208ENST00000554811 ESAMQ96AP7 390 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms