RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 A0A1B0GTW7 788 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 KPNA3O00505 521 aaPredicted RBP20.74■□□□□ 0.91
FOXA1-203ENST00000553751 DAPK3O43293 454 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 PLRG1O43660 514 aaKnown RBP20.74■□□□□ 0.91
FOXA1-203ENST00000553751 BUB1O43683 1085 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 LEFTY1O75610 366 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 PROSCO94903 275 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 DNA2P51530 1060 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 CCNHP51946 323 aaPredicted RBP20.74■□□□□ 0.91
FOXA1-203ENST00000553751 ARHGAP12Q8IWW6 846 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 PLPP6Q8IY26 295 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 OR14C36Q8NHC7 312 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 ARRDC3Q96B67 414 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 SLC39A8Q9C0K1 460 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 PDFQ9HBH1 243 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 TMEM9BQ9NQ34 198 aa20.74■□□□□ 0.91
FOXA1-203ENST00000553751 C4orf47A7E2U8 309 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 H3BRJ5 948 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 BCAT2O15382 392 aaPredicted RBP20.73■□□□□ 0.91
FOXA1-203ENST00000553751 TMCC1O94876 653 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 GSRP00390 522 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 CD27P26842 260 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 ARSIQ5FYB1 569 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 PIP5KL1Q5T9C9 394 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 POLNQ7Z5Q5 900 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 OR2AP1Q8NGE2 309 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 CASKIN2Q8WXE0 1202 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 VOPP1Q96AW1 172 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 HEPHQ9BQS7 1158 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 PCDH18Q9HCL0 1135 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 HECAQ9UBI9 543 aaPredicted RBP20.73■□□□□ 0.91
FOXA1-203ENST00000553751 LCMT1Q9UIC8 334 aa20.73■□□□□ 0.91
FOXA1-203ENST00000553751 ADAMTS9Q9P2N4 1935 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 ARHGAP33O14559 1287 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 TM4SF5O14894 197 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 ARL4AP40617 200 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 MAPK8P45983 427 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 CCR5P51681 352 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 PPP2CBP62714 309 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 PPP2CAP67775 309 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 INO80DQ53TQ3 878 aaPredicted RBP20.72■□□□□ 0.91
FOXA1-203ENST00000553751 DGLUCYQ7Z3D6 616 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 OR6K2Q8NGY2 324 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 TSC1Q92574 1164 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 CSPG4P5Q96PW8 444 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 KDM4CQ9H3R0 1056 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 EBF2Q9HAK2 575 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 MFHAS1Q9Y4C4 1052 aa20.72■□□□□ 0.91
FOXA1-203ENST00000553751 A0A1W2PPC4 97 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 DCDC2BA2VCK2 349 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 ARHGAP42A6NI28 874 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 J3KR12 359 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 PRAMEF11O60813 436 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 MAN1A1P33908 653 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 SSR1P43307 286 aaKnown RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 PAPOLAP51003 745 aaKnown RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 TAS2R38P59533 333 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 SNRPD1P62314 119 aaKnown RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 GRIK2Q13002 908 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 HADHQ16836 314 aaKnown RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 ATXN7L2Q5T6C5 722 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 NETO2Q8NC67 525 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 SLC35G2Q8TBE7 412 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 FAM71BQ8TC56 605 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 PPP1R16AQ96I34 528 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 GTPBP2Q9BX10 602 aaKnown RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 HDAC8Q9BY41 377 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 ZDHHC6Q9H6R6 413 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 TM9SF3Q9HD45 589 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 ETNK2Q9NVF9 386 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 CNOT1A5YKK6 2376 aaKnown RBP20.71■□□□□ 0.91
FOXA1-203ENST00000553751 SPTBN2O15020 2390 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 PLXNA2O75051 1894 aa20.71■□□□□ 0.91
FOXA1-203ENST00000553751 TBC1D3DA0A087WVF3 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3IA0A087WXS9 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3EA0A087X179 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3KA0A087X1G2 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3FA6NER0 549 aaPredicted RBP20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3LB9A6J9 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 LATO43561 262 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 MTA2O94776 668 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 SYPP08247 313 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3HP0C7X1 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 AMPD1P23109 780 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 ITGB7P26010 798 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 GKP32189 559 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 ARSEP51690 589 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 AFF3P51826 1226 aaKnown RBP20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TAS2R40P59535 323 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 RHOAP61586 193 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 BNC1Q01954 994 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3GQ6DHY5 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3CQ6IPX1 549 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 ERN2Q76MJ5 926 aaKnown RBP20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TP53INP2Q8IXH6 220 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 RHOT2Q8IXI1 618 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 TBC1D3Q8IZP1 549 aaPredicted RBP20.7■□□□□ 0.9
FOXA1-203ENST00000553751 RYBPQ8N488 228 aaPredicted RBP20.7■□□□□ 0.9
FOXA1-203ENST00000553751 OR2I1PQ8NGU4 316 aa20.7■□□□□ 0.9
FOXA1-203ENST00000553751 RFFLQ8WZ73 363 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms