RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 FCF1Q9Y324 198 aaKnown RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 HYOU1Q9Y4L1 999 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 BAHCC1Q9P281 2608 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 LRRD1A4D1F6 860 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 J3KR12 359 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 KRT86O43790 486 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 FOXD2O60548 495 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 PRAMEF11O60813 436 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ZNF821O75541 412 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 PALMO75781 387 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ZRANB2O95218 330 aaKnown RBP eCLIP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 POP4O95707 220 aaKnown RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ADH1BP00325 375 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 IGLV3-19P01714 112 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 PRNPP04156 253 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 HOXB3P14651 431 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ZFXP17010 805 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 DHPSP49366 369 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 RPL6Q02878 288 aaKnown RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 IL10RBQ08334 325 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 RFTN1Q14699 578 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 C11orf63Q6NUN7 778 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 C22orf39Q6P5X5 142 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 DPY19L3Q6ZPD9 716 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 VSIG1Q86XK7 387 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 CACUL1Q86Y37 369 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 TMEFF1Q8IYR6 380 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 RCOR2Q8IZ40 523 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 SYCE1Q8N0S2 351 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 HDDC3Q8N4P3 179 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 RNF10Q8N5U6 811 aaKnown RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 PCDH19Q8TAB3 1148 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 NSMCE1Q8WV22 266 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 FOXJ1Q92949 421 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 TOE1Q96GM8 510 aaKnown RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 LRIG1Q96JA1 1093 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 RNF157Q96PX1 679 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 TSGA10Q9BZW7 698 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 NEUROG2Q9H2A3 272 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 PABPC3Q9H361 631 aaKnown RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 SP110Q9HB58 689 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 SGK2Q9HBY8 427 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ETNK2Q9NVF9 386 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 KLHL11Q9NVR0 708 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 HECAQ9UBI9 543 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 UBA2Q9UBT2 640 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 IPO11Q9UI26 975 aaKnown RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 MBD1Q9UIS9 605 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ACTL7AQ9Y615 435 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ADGRG1Q9Y653 693 aa10.81□□□□□ -0.68
PTCH1-225ENST00000551845 ATG2BQ96BY7 2078 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 A0A1W2PP55 124 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 MACROD2A1Z1Q3 448 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 ZNF487B1APH4 448 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 MID1O15344 667 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 PSTPIP1O43586 416 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 RNASEH2AO75792 299 aaKnown RBP10.8□□□□□ -0.68
PTCH1-225ENST00000551845 GSRP00390 522 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 KRT1P04264 644 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 PROS1P07225 676 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 CCDC175P0C221 793 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 MX2P20592 715 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 BCKDHBP21953 392 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 PSMD8P48556 350 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 RHOAP61586 193 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 ZNF33AQ06730 810 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 PAFAH1B3Q15102 231 aaKnown RBP10.8□□□□□ -0.68
PTCH1-225ENST00000551845 CYTH1Q15438 398 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 MYLK3Q32MK0 819 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 ARSIQ5FYB1 569 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 TMCO4Q5TGY1 634 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-225ENST00000551845 FAM124AQ86V42 546 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 ARHGAP12Q8IWW6 846 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 BBS5Q8N3I7 341 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 DEFB119Q8N690 84 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 NPWQ8N729 165 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 C12orf50Q8NA57 414 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-225ENST00000551845 CADM4Q8NFZ8 388 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 OR2AP1Q8NGE2 309 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 PIP4K2CQ8TBX8 421 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 FAF2Q96CS3 445 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 ZNF419Q96HQ0 510 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-225ENST00000551845 ZNF599Q96NL3 588 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 GPR174Q9BXC1 333 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 DYRK4Q9NR20 520 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 IL36AQ9UHA7 158 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 AMFRQ9UKV5 643 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 USP24Q9UPU5 2620 aa10.8□□□□□ -0.68
PTCH1-225ENST00000551845 CCDC66A2RUB6 948 aa10.79□□□□□ -0.68
PTCH1-225ENST00000551845 METTL12A8MUP2 240 aa10.79□□□□□ -0.68
PTCH1-225ENST00000551845 KPNA3O00505 521 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-225ENST00000551845 APOL1O14791 398 aa10.79□□□□□ -0.68
PTCH1-225ENST00000551845 LEFTY1O75610 366 aa10.79□□□□□ -0.68
PTCH1-225ENST00000551845 TMCC1O94876 653 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms