RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FYB2Q5VWT5 728 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 PAPD7Q5XG87 772 aaKnown RBP12.35□□□□□ -0.43
HDAC7-226ENST00000547259 MFN1Q8IWA4 741 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 FRMD1Q8N878 549 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 RTL3Q8N8U3 475 aaKnown RBP12.35□□□□□ -0.43
HDAC7-226ENST00000547259 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 FAF2Q96CS3 445 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 PBKQ96KB5 322 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 OSBPL9Q96SU4 736 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 OSBPL8Q9BZF1 889 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 TMEM248Q9NWD8 314 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 APOL1O14791 398 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 FANCGO15287 622 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 HYAL3O43820 417 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 PENKP01210 267 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 RHOCP08134 193 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 KRT10P13645 584 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ZFXP17010 805 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 TCP1P17987 556 aaKnown RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 NDUFV2P19404 249 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 IL4RP24394 825 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 MAPKAPK2P49137 400 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 DYNLT1P63172 113 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF177Q13360 481 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 TAZQ16635 292 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ARTNQ5T4W7 220 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 CCDC181Q5TID7 509 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 EGFLAMQ63HQ2 1017 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 IL27RAQ6UWB1 636 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ANKS1BQ7Z6G8 1248 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 NLRP14Q86W24 1093 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 HSPA12BQ96MM6 686 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 HEMGNQ9BXL5 484 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ZDHHC4Q9NPG8 344 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 DONSONQ9NYP3 566 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 CYP8B1Q9UNU6 501 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 SLC27A6Q9Y2P4 619 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 SAR1BQ9Y6B6 198 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 GOLGA4Q13439 2230 aaKnown RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 PCDH15Q96QU1 1955 aa12.34□□□□□ -0.43
HDAC7-226ENST00000547259 ATXN2Q99700 1313 aaKnown RBP12.34□□□□□ -0.43
HDAC7-226ENST00000547259 SPEGQ15772 3267 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 CHD5Q8TDI0 1954 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 A0A1B0GTW7 788 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 SPAARA0A1B0GVQ0 90 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 WASH4PA8MWX3 477 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 TIMM44O43615 452 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
HDAC7-226ENST00000547259 CST8O60676 142 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 TJP3O95049 919 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 CD6P30203 668 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 OR1E1P30953 314 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 SERPINB6P35237 376 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 WASP42768 502 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 EIF4HQ15056 248 aaKnown RBP12.33□□□□□ -0.44
HDAC7-226ENST00000547259 TRIP6Q15654 476 aaKnown RBP12.33□□□□□ -0.44
HDAC7-226ENST00000547259 C6orf118Q5T5N4 469 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 NCBP2-AS2Q69YL0 99 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 SLC9A4Q6AI14 798 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 KIAA1211LQ6NV74 962 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 PQLC3Q8N755 202 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 ZNF557Q8N988 423 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-226ENST00000547259 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 MRGPRX1Q96LB2 322 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 PCED1AQ9H1Q7 454 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 RETREG1Q9H6L5 497 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 PRDM16Q9HAZ2 1276 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 ETNK2Q9NVF9 386 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 FBXO10Q9UK96 956 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 MFHAS1Q9Y4C4 1052 aa12.33□□□□□ -0.44
HDAC7-226ENST00000547259 WDFY3Q8IZQ1 3526 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 MEI4A8MW99 385 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 PRRT4C9JH25 899 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 CES2O00748 559 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 MFSD11O43934 449 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 RAMP2O60895 175 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 TOP3BO95985 862 aaKnown RBP12.32□□□□□ -0.44
HDAC7-226ENST00000547259 CISD3P0C7P0 127 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 ZNF883P0CG24 379 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 ACADMP11310 421 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 CD59P13987 128 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 PRLRP16471 622 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 TGM2P21980 687 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 PAFAH1B3Q15102 231 aaKnown RBP12.32□□□□□ -0.44
HDAC7-226ENST00000547259 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 CXorf57Q6NSI4 855 aaKnown RBP12.32□□□□□ -0.44
HDAC7-226ENST00000547259 KIAA1324Q6UXG2 1013 aaKnown RBP12.32□□□□□ -0.44
HDAC7-226ENST00000547259 BBS12Q6ZW61 710 aa12.32□□□□□ -0.44
HDAC7-226ENST00000547259 RAB44Q7Z6P3 723 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-226ENST00000547259 SETD3Q86TU7 594 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms