RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MAP7D1Q3KQU3 841 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 USP39Q53GS9 565 aaKnown RBP20.81■□□□□ 0.92
HMGA2-211ENST00000545998 ZC3H14Q6PJT7 736 aaKnown RBP20.81■□□□□ 0.92
HMGA2-211ENST00000545998 OR2AP1Q8NGE2 309 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 ATOH1Q92858 354 aaPredicted RBP20.81■□□□□ 0.92
HMGA2-211ENST00000545998 CD93Q9NPY3 652 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 ITM2CQ9NQX7 267 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 SAE1Q9UBE0 346 aaPredicted RBP20.81■□□□□ 0.92
HMGA2-211ENST00000545998 SARDHQ9UL12 918 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 R4GN57 208 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 NUMA1Q14980 2115 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 HRO43593 1189 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF217O75362 1048 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 IL1BP01584 269 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 ACADMP11310 421 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PECAM1P16284 738 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 CCNCP24863 283 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 CHRNA3P32297 505 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 P2RY2P41231 377 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 CCNHP51946 323 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 SNRPD1P62314 119 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 SLC10A7Q0GE19 358 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 SRSF5Q13243 272 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 LBRQ14739 615 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PDK1Q15118 436 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 RPS6KA1Q15418 735 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 ATXN7L2Q5T6C5 722 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 TIGD7Q6NT04 549 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 DSG4Q86SJ6 1040 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 LRRN4Q8WUT4 740 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 GAB3Q8WWW8 586 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 RLN3Q8WXF3 142 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 TLR10Q9BXR5 811 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 HECAQ9UBI9 543 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 SCML1Q9UN30 329 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 MATN3O15232 486 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 MID1O15344 667 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 RPP40O75818 363 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 ADH1BP00325 375 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 IGLV3-19P01714 112 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 DNTTP04053 509 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PSMD8P48556 350 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 TPMTP51580 245 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PPIDQ08752 370 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 BZW1Q7L1Q6 419 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 TSEN2Q8NCE0 465 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 TMIEQ8NEW7 156 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PIP4K2CQ8TBX8 421 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 MAML1Q92585 1016 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 VOPP1Q96AW1 172 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 GDAP1L1Q96MZ0 367 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PSKH2Q96QS6 385 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 LGMNQ99538 433 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 HEPHQ9BQS7 1158 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 CINPQ9BW66 212 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 PABPC3Q9H361 631 aaKnown RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 SEPT3Q9UH03 358 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 IL36AQ9UHA7 158 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 ARIH1Q9Y4X5 557 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-211ENST00000545998 WASF2Q9Y6W5 498 aa20.8■□□□□ 0.92
HMGA2-211ENST00000545998 SDK1Q7Z5N4 2213 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 GOLGA6L9A6NEM1 432 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 APOC4-APOC2K7ER74 178 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 IGSF6O95976 241 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 APOC2P02655 101 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 SLC8A1P32418 973 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF33AQ06730 810 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 BYSLQ13895 437 aaKnown RBP20.79■□□□□ 0.92
HMGA2-211ENST00000545998 MYLK3Q32MK0 819 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 TEX26Q8N6G2 289 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 FRMD1Q8N878 549 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 CCNYQ8ND76 341 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 NSMCE1Q8WV22 266 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 P3H4Q92791 437 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF419Q96HQ0 510 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-211ENST00000545998 EXOC2Q96KP1 924 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 FAM86C1Q9NVL1 165 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 CYP8B1Q9UNU6 501 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 INVSQ9Y283 1065 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 ANKRD36A6QL64 1941 aa20.79■□□□□ 0.92
HMGA2-211ENST00000545998 CEP192Q8TEP8 1941 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 IGHV1OR15-9A0A0B4J2B8 117 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 RNF103O00237 685 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 PPP1R12AO14974 1030 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-211ENST00000545998 MUSKO15146 869 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 LEFTY1O75610 366 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 TJP3O95049 919 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 PRNPP04156 253 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 C5AR1P21730 350 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 RGRP47804 291 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 METAP1P53582 386 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 NSUN2Q08J23 767 aaKnown RBP eCLIP20.78■□□□□ 0.92
HMGA2-211ENST00000545998 HNRNPDQ14103 355 aaKnown RBP20.78■□□□□ 0.92
HMGA2-211ENST00000545998 TTC31Q49AM3 519 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-211ENST00000545998 ARSIQ5FYB1 569 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 MARC1Q5VT66 337 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 FAM46CQ5VWP2 391 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 CCDC13Q8IYE1 715 aa20.78■□□□□ 0.92
HMGA2-211ENST00000545998 FAM160A2Q8N612 972 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-211ENST00000545998 OR6K2Q8NGY2 324 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms