RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TMEM25Q86YD3 366 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 ST13P5Q8NFI4 369 aaPredicted RBP9.7□□□□□ -0.86
YBX3-215ENST00000544504 WFIKKN2Q8TEU8 576 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 MAML1Q92585 1016 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 HMCESQ96FZ2 354 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 SNF8Q96H20 258 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 SPATA13Q96N96 652 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 LGMNQ99538 433 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 FAM83CQ9BQN1 747 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 RHOXF2Q9BQY4 288 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 ACE2Q9BYF1 805 aaPredicted RBP9.7□□□□□ -0.86
YBX3-215ENST00000544504 USP29Q9HBJ7 922 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 ATP13A1Q9HD20 1204 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 GOLGA6AQ9NYA3 693 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 WHRNQ9P202 907 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 VPS28Q9UK41 221 aa9.7□□□□□ -0.86
YBX3-215ENST00000544504 MRPS17Q9Y2R5 130 aaKnown RBP9.7□□□□□ -0.86
YBX3-215ENST00000544504 LOC400499M0QZD8 3231 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 PSMD3O43242 534 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 ERLIN1O75477 346 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 MAP3K6O95382 1288 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 ASLP04424 464 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 CYP17A1P05093 508 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 CCNB1P14635 433 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 CES1P23141 567 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 TNFRSF8P28908 595 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 SGSHP51688 502 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 CLCN6P51797 869 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 CDK16Q00536 496 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 GUCY2DQ02846 1103 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 MTAPQ13126 283 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 RUNX3Q13761 415 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 PRPSAP1Q14558 356 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 LPAL2Q16609 132 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 ITPRIPL2Q3MIP1 535 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 MAP9Q49MG5 647 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 TEX44Q53QW1 395 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 INO80DQ53TQ3 878 aaPredicted RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 N4BP2L1Q5TBK1 243 aaPredicted RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 MARC1Q5VT66 337 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 ZFYVE26Q68DK2 2539 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 DUPD1Q68J44 220 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 WDR93Q6P2C0 686 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 RHBDF2Q6PJF5 856 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 POTEHQ6S545 545 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 ZNF852Q6ZMS4 543 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.69□□□□□ -0.86
YBX3-215ENST00000544504 LRRN4CLQ8ND94 238 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 RIN3Q8TB24 985 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 SEC14L1Q92503 715 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 RSPRY1Q96DX4 576 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 MYEOVQ96EZ4 313 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 IL12RB2Q99665 862 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 KXD1Q9BQD3 176 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 FEM1AQ9BSK4 669 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 SPON2Q9BUD6 331 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 FRMD8Q9BZ67 464 aaPredicted RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 FOXP3Q9BZS1 431 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 LINC00597Q9H2U6 94 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 NOL6Q9H6R4 1146 aaKnown RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 ECT2Q9H8V3 914 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 EPB41L5Q9HCM4 733 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 TRPV5Q9NQA5 729 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 NDFIP2Q9NV92 336 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 ARGLU1Q9NWB6 273 aaPredicted RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 SEPT10Q9P0V9 454 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 KLHL8Q9P2G9 620 aaPredicted RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 UBA2Q9UBT2 640 aaPredicted RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
YBX3-215ENST00000544504 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
YBX3-215ENST00000544504 FASNP49327 2511 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 DOCK8Q8NF50 2099 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 ERI2A8K979 691 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 E7EVH7 732 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TIMM44O43615 452 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 GDF9O60383 454 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 ANXA9O76027 345 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 JCHAINP01591 159 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 PABPC1P11940 636 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 TDGF1P13385 188 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 VAV1P15498 845 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TARSP26639 723 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 GDI1P31150 447 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 RPL22P35268 128 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 CSKP41240 450 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 DGKGP49619 791 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 SARNPP82979 210 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 SLC7A5Q01650 507 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TNK2Q07912 1038 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 WASHC5Q12768 1159 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 GPS1Q13098 491 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 ZNF235Q14590 738 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 LBRQ14739 615 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 MORF4L2Q15014 288 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 EIF4HQ15056 248 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 PARP6Q2NL67 630 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 PLEKHG6Q3KR16 790 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 ANKRD20A2Q5SQ80 823 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms